| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4855 |
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| Symbol | |
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| ID | 6872651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 4705792 |
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| End bp | 4706604 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642787742 |
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| Product | tRNA-(ms[2]io[6]A)-hydroxylase |
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| Protein accession | YP_002218336 |
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| Protein GI | 198244684 |
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| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4445] Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTAC GGCAGCGTCT GCTGTCGTAT TTTTTTAACA GGTTACGTAT GAATTACCCG
CAAATACTCT CTCCGGTGCT TAATTTCCTG CATTGCCCGA CGCCGCAGGC GTGGATTGTC
CAGGCCCGCG ATCCGCAAAA TCTTCCTCTT CTGCTTACCG ATCACTTGAT CTGCGAACTG
AAGGCTGCGC AAACCGCGTT GCTGTTGGTG CGTAAATATG TCGCCAATAA ATCGGGCGCC
GACGCGCTGC TCGCCTGGCT GCAACCTTAC GAGGCGTTCG CGTTTCGTCA GGGGCCGGAG
CCGGATTTTG TTGCCCTGCA TAAACAGATT AGCAAAAGCG CCATGCCGCA AACTGATGAC
CCCTGGGGAC GTCAGCTTAT CGACCGTATG GTGTTATTGA TTAAAGAGGA GTTGCACCAT
TTTTGGCAGG TACGCGAGGT CATGCAGGCC AGAAACATTC CTTATGTGAA AATCACCGCC
AGCCGCTACG CGAAAGGAAT GTTGAAAGCG GTACGCACGC ACGAACCGCT CACCTTAATT
GATAAGCTGA TTTGCGGGGC GTATATCGAA GCCCGCTCCT GCGAACGTTT TGCCGCTCTG
GCGCCCTGGC TGGATGAGGA TTTACAGACG TTTTATCTCT CGCTTCTGCG CTCCGAAGCG
CGGCATTATC AGGATTACCT GGCGCTGGCG CAGCAGATTT CCGCCGAGGA CATTTCTGCG
CGCGTGCGCT ATTTTGGCGA GGTGGAAGCT GACCTTATCT TGTCGCCAGA CCGCGAGTTT
CGTTTTCATA GCGGCGTGCC AGCCGCCGGA TAA
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| Protein sequence | MTVRQRLLSY FFNRLRMNYP QILSPVLNFL HCPTPQAWIV QARDPQNLPL LLTDHLICEL
KAAQTALLLV RKYVANKSGA DALLAWLQPY EAFAFRQGPE PDFVALHKQI SKSAMPQTDD
PWGRQLIDRM VLLIKEELHH FWQVREVMQA RNIPYVKITA SRYAKGMLKA VRTHEPLTLI
DKLICGAYIE ARSCERFAAL APWLDEDLQT FYLSLLRSEA RHYQDYLALA QQISAEDISA
RVRYFGEVEA DLILSPDREF RFHSGVPAAG
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