Gene SeD_A4846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4846 
Symbol 
ID6871660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4698254 
End bp4699657 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content56% 
IMG OID642787733 
ProductC4-dicarboxylate anaerobic carrier 
Protein accessionYP_002218327 
Protein GI198243091 
COG category[S] Function unknown 
COG ID[COG1288] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAAT TTAAATTTCC CACCGCTTAT ACCATCCTGT TTATTCTTAT TGCCCTGGTC 
GCGGTGATGA CCTGGATTGT GCCGGCGGGA AAATACCAAA TGGCGATGAA CGCCACGCTG
GGAAAAGAGG TGCCGGTGGC GGGAACGTAT GCCCCTGTGG ACGCGCATCC GCAAGGGATT
ACCGCTGTTT TACTGGCGCC GATTGACGGC CTCTATAACC ACGAAACCTA CACCGCCGGC
GCCATTGACG TCGCGCTGTT TGTCTTGATT ATCGGCGGCT TTCTGGGGGT GGTGAATAAA
ACGGGGGCGA TTGATGCCGG TATTGAACGG GTAACAGCCA AACTCAACGG CAAAGATGAG
TGGATGATCC CCATTCTGAT GGCGCTGTTC GCCGCAGGCG GCACTATCTA TGGCATGGCG
GAGGAGTCGT TGCCCTTCTA CACGCTGCTG GTGCCGGTCA TGATGGCGGC CCGCTTCGAT
CCGTTAGTGG CGGCGGCAAC CGTACTGCTC GGCGCGGGGA TAGGCTCGCT CGGTTCGACC
ATTAACCCTT TCGCCACGGT CATTGCCGCC AACGCCGCCG GCATCCCTTT TACTCAGGGA
ATGCTGATGC GCGTACTGCT GTTAATTGTC GGCTACGTAC TGTGCGTGTT TTGGGTAATG
CGCTATGCGC GCAAAGTCCG CGCCCATCCT GAGCTTTCTA TCGTGGCGGA TAAAATGGAG
GAAAACCGCG CCCATTTCCT CGGCAATCGC GCCAATACTC TGCTGGAGTT TACGGCTACC
CGGAAATGGG TGCTGCTGAT CTTCGCCGCC TCTTTCGCGG TGATGATTTA CGGCGTGGCG
GTTCTCGGCT GGTGGATGGC GGAAATCTCC AGCGTCTTTC TGGCGGCGAC GATTATCGTT
GGCGTGATAA CGCGGATGGG TGAGGAAGCG TTCACCAGTA CCTTTATTGA CGGCGCGCGG
GATTTACTCG GCGTGGCGCT AATTATTGGT ATCGCGCGCG GCATTGTGGT GGTCATGGAT
AACGGTATGA TTACCCACAC CATTTTGCAC AGCGCGGAAA GTCTGGTTTC CGGCCTCTCT
ACCACCATTT TCATAAACGT AACCTACTGG CTGGAAGTAT TGCTCTCCTT CCTGGTGCCC
TCCTCTTCCG GTCTTGCCGT ATTGACAATG CCCATTATGG CGCCGTTAGC GGATTTTGCC
CACGTACAGC GGGATTTGGT CGTAACCGCC TACCAGTCGG CCTCCGGGAT TGTGAACCTG
GTTACGCCCA CCTCCGCCGT GGTCATGGGC GGTCTGGCGA TCGCGCGGGT TCCCTATGTT
CGCTATCTGA AATGGGTCGC GCCGCTGTTA CTGATCCTGA CATTGCTGAA TATGGCGGTA
CTGAGCATCG GAGCGATGAT GTAA
 
Protein sequence
MGKFKFPTAY TILFILIALV AVMTWIVPAG KYQMAMNATL GKEVPVAGTY APVDAHPQGI 
TAVLLAPIDG LYNHETYTAG AIDVALFVLI IGGFLGVVNK TGAIDAGIER VTAKLNGKDE
WMIPILMALF AAGGTIYGMA EESLPFYTLL VPVMMAARFD PLVAAATVLL GAGIGSLGST
INPFATVIAA NAAGIPFTQG MLMRVLLLIV GYVLCVFWVM RYARKVRAHP ELSIVADKME
ENRAHFLGNR ANTLLEFTAT RKWVLLIFAA SFAVMIYGVA VLGWWMAEIS SVFLAATIIV
GVITRMGEEA FTSTFIDGAR DLLGVALIIG IARGIVVVMD NGMITHTILH SAESLVSGLS
TTIFINVTYW LEVLLSFLVP SSSGLAVLTM PIMAPLADFA HVQRDLVVTA YQSASGIVNL
VTPTSAVVMG GLAIARVPYV RYLKWVAPLL LILTLLNMAV LSIGAMM