| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4835 |
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| Symbol | treB |
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| ID | 6875410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 4689247 |
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| End bp | 4690665 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642787724 |
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| Product | PTS system trehalose(maltose)-specific transporter subunits IIBC |
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| Protein accession | YP_002218318 |
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| Protein GI | 198246006 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component
[TIGR01992] PTS system, trehalose-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAG TAAAACAAGC CGATATCGAC CGGCTGATTG ACCTGGTCGG CGGGCGCGAC
AACATCGCCA CGGTGAGCCA CTGCATTACT CGCCTGCGCT TTGTGCTCCA CCAGCCCGCG
AACGCCAGGC CAAAAGAGCT CGAACAATTA CCGATGGTTA AAGGCTGTTT CACCAACGCC
GGGCAGTTTC AGGTGGTGAT TGGCACCGAC GTTGGCGATT ACTATAACGC GCTGCTGGAG
ACCACCGGCA AAGCGTATGC TGATAAAGAG CAGGCCAAAA AAGCCGCTCG CCAGAACATG
AAGTGGCATG AGCAGTTAAT TTCCCACTTT GCGGAGATCT TCTTTCCGCT ACTACCGGCG
TTGATCAGCG GCGGTTTGAT CTTAGGCTTT CGTAACGTGA TCGGCGATGT GCCGATGAGC
AACGGCCAAA CGCTGGCGCA GATGCATCCG GCGCTAAAAA CGCTTTATGA TTTTTTATGG
TTGATCGGCG AAGCGATCTT TTTCTATCTG CCGGTGGGGA TCTGCTGGTC GGCGGTGAAA
AAAATGGGCG GCACGCCGAT TCTTGGTATC GTGCTCGGCG TGACGCTGGT GTCGCCGCAG
TTGATGAATG CGTATCTGCT GGGCCAGCAA ACGCCGGACG TCTGGAACTT CGGCTTATTT
AGCATTGAGA AAGTGGGCTA CCAGGCGCAG GTTATCCCGG CGCTACTGGC AGGGCTGGCG
CTTGGATTTA TTGAAACGCG GTTGAAACGC ATCGTGCCGG ATTATCTCTA CCTGGTCGTC
GTCCCGGTGT GTTCGTTAAT ACTGGCCGTC TTTCTCGCCC ACACCTTTAT CGGCCCCTTT
GGTCGTATGA TCGGCGACGG CGTGGCCTTT GCGGTACGTT ATCTGATGAC CGGCAGTTTC
GCCCCGATAG GCGCGGCGCT GTTCGGCTTC CTGTATGCCC CGCTGGTCAT TACCGGTGTC
CACCAGACAA CGCTCGCTAT CGATATGCAG ATGATCCAGA GCATGGGCGG TACGCCAGTC
TGGCCGCTGA TTGCGCTGTC GAATATCGCA CAGGCCTCTG CCGTGGTGGG CATCATCATC
TCCAGCCGTA AACACAATGA ACGCGAGATC TCCGTTCCTG CCGCCATTTC CGCTTACCTT
GGGGTAACTG AACCGGCGAT GTACGGTATC AACCTGAAGT ATCGTTTTCC GATGCTGTGC
GCGATGATCG GCTCTGGTCT GGCGGGACTG CTCTGCGGTC TGAACGGCGT CATCGCCAAC
GGTATCGGCG TGGGCGGCCT GCCGGGCATC CTGTCTATAC CGCCGCGCTA CTGGCAGGTG
TACGGCATGG CGATGGTTAT CGCGATCGTG ATCCCGGTGA TTCTGACCAC CTTTATCTAT
CAGCGTAAGC ATCGTCAGGG CACATTACAA ATTGTCTAA
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| Protein sequence | MSKVKQADID RLIDLVGGRD NIATVSHCIT RLRFVLHQPA NARPKELEQL PMVKGCFTNA
GQFQVVIGTD VGDYYNALLE TTGKAYADKE QAKKAARQNM KWHEQLISHF AEIFFPLLPA
LISGGLILGF RNVIGDVPMS NGQTLAQMHP ALKTLYDFLW LIGEAIFFYL PVGICWSAVK
KMGGTPILGI VLGVTLVSPQ LMNAYLLGQQ TPDVWNFGLF SIEKVGYQAQ VIPALLAGLA
LGFIETRLKR IVPDYLYLVV VPVCSLILAV FLAHTFIGPF GRMIGDGVAF AVRYLMTGSF
APIGAALFGF LYAPLVITGV HQTTLAIDMQ MIQSMGGTPV WPLIALSNIA QASAVVGIII
SSRKHNEREI SVPAAISAYL GVTEPAMYGI NLKYRFPMLC AMIGSGLAGL LCGLNGVIAN
GIGVGGLPGI LSIPPRYWQV YGMAMVIAIV IPVILTTFIY QRKHRQGTLQ IV
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