| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4834 |
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| Symbol | treC |
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| ID | 6874748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 4687545 |
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| End bp | 4689197 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642787723 |
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| Product | trehalose-6-phosphate hydrolase |
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| Protein accession | YP_002218317 |
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| Protein GI | 198245932 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02403] alpha,alpha-phosphotrehalase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATTC CCCTCTGGTG GCAAAACGGC GTTATTTATC AGATCTACCC GAAAAGTTTT
CAGGACACGA CCGGCAGCGG CACTGGCGAT TTACGCGGCG TCACGCAGCG CCTTGACTAT
CTACAGCGAC TCGGCGTGGA CGCCATCTGG CTCACGCCGT TTTATATCTC GCCGCAGGTG
GATAACGGTT ATGACGTCGC AAATTATACG GCTATCGACC CGACCTACGG CACGCTGGAT
GATTTTGACG AGCTGGTCGC GCAGGCGAAA GCACGCGGTA TTCGTATCAT CCTGGATATG
GTGTTTAACC ATACTTCTAC CCAGCACGCC TGGTTTCGCG AAGTGCTGAA CAAAGAGAGT
CCATACCGTC AGTTTTATAT CTGGCGCGAT GGCACGCCGG ATGTCTGCCC GAATAACTGG
CAATCCAAAT TTGGCGGCAG CGCCTGGCGC TGGCATAGCC AGAGCGAACA ATATTATTTA
CACCTTTTCG CGCCTGAACA GGCCGACCTG AACTGGGAAA ACCCCGCCGT ACGCGCCGAG
CTGAAAAAGG TCTGCGAATT CTGGGCCGAT CGCGGCGTGG ATGGCCTGCG TCTGGACGTG
GTGAACCTGA TCGCCAAAGA TCAGAATTTT CCTGACGATC CGACGGGCGA CGGACGCCGC
TTTTATACCG ACGGGCCGCG CGCGCATACG TTTTTACGCG AAATGAACCG TGACGTTTTT
ACGCCGCGTA ATCTGATGAC GGTAGGCGAA ATGTCCTCTA CCACGCTGGA AAACTGCCAG
CAATATGCCG CGCTTAGCGG CGACGAACTC TCGATGACCT TCAATTTTCA TCATCTGAAG
GTGGATTACC CCAATGGCGA AAAGTGGACG CTGGCAAAAC CTGATTATGT GGCGCTGAAA
GCGTTGTTCC GCCACTGGCA ACAGGGGATG CATAACGTCG CCTGGAACGC GTTATTCTGG
TGTAATCACG ATCAGCCGCG CATCGTTTCC CGCTTTGGCG GCGAGGGTGA ATACCGGGTT
CCAGCCGCGA AAATGTTGGC GATGGCGCTG CACGGTATGC AAGGGACGCC TTATATCTAT
CAGGGCGAAG AAATCGGCAT GACCAACCCA CACTTTACCC ACATCACCGA TTATCGCGAC
GTGGAAAGCC ATAACATGTT TGCCGCGCTA CGCGCCGCCG GGCGCGACCC CGACGAACTG
CTGGCTATTC TGGCCAGTAA ATCCCGCGAC AACAGCCGCA CGCCGATGCA ATGGGACAAC
GGTAAAAACG CCGGTTTCAC CCAAGGCGAG CCGTGGATAA GCCTGTGCGA TAACTATACG
GAGGTTAACG TCGAGGCAGC ATTACGCGAT GAAAACTCGG TGTTTTACAC CTATCAAAAG
CTGATTGCGC TACGTAAAAC CCAGCCTGTA CTGATCTGGG GCGATTATCA GGATCTCCTC
CCGGATAGCC CATCAGTATG GTGTTATCGC CGCCAGTGGC AGGGGCAAAC CCTGCTGGTT
GTCGCCAATC TGAGCGACCA GTGCCAGGAG TGGCATCCGC CGCATATCAA AGGACAGTGG
CAGGCGCTAC TGCATAATTA TGGCGAGGTC GCCAGCCAGC CAGCCGCGAT GACGCTCCGC
CCATTTGAAG CCATCTGGTG GTTACAACGC TAA
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| Protein sequence | MTIPLWWQNG VIYQIYPKSF QDTTGSGTGD LRGVTQRLDY LQRLGVDAIW LTPFYISPQV
DNGYDVANYT AIDPTYGTLD DFDELVAQAK ARGIRIILDM VFNHTSTQHA WFREVLNKES
PYRQFYIWRD GTPDVCPNNW QSKFGGSAWR WHSQSEQYYL HLFAPEQADL NWENPAVRAE
LKKVCEFWAD RGVDGLRLDV VNLIAKDQNF PDDPTGDGRR FYTDGPRAHT FLREMNRDVF
TPRNLMTVGE MSSTTLENCQ QYAALSGDEL SMTFNFHHLK VDYPNGEKWT LAKPDYVALK
ALFRHWQQGM HNVAWNALFW CNHDQPRIVS RFGGEGEYRV PAAKMLAMAL HGMQGTPYIY
QGEEIGMTNP HFTHITDYRD VESHNMFAAL RAAGRDPDEL LAILASKSRD NSRTPMQWDN
GKNAGFTQGE PWISLCDNYT EVNVEAALRD ENSVFYTYQK LIALRKTQPV LIWGDYQDLL
PDSPSVWCYR RQWQGQTLLV VANLSDQCQE WHPPHIKGQW QALLHNYGEV ASQPAAMTLR
PFEAIWWLQR
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