Gene SeD_A4812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4812 
Symbol 
ID6874123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4668545 
End bp4669708 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content48% 
IMG OID642787702 
Productputative metallo-dependent hydrolase 
Protein accessionYP_002218296 
Protein GI198244104 
COG category[R] General function prediction only 
COG ID[COG3964] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA ATGATATATT AATTACCGGT GGACATATCA TCGATCCCGC TCGTAATATT 
AATGAGATTA ACAATTTACG CATCATTAAC GATATTATCG TTGATGCCGA TAAATATCCT 
GTAACTTCGG AGACCCGGAT TATCCATGCC GACGGTATGA TCGTCACTCC CGGTCTTATC 
GATTATCACG CGCATGTTTT TTATGACGCG ACGGAAGGCG GCGTCAGGCC TGATATGTAC 
ATGCCGCCGA ATGGCGTCAC CACCGTCGTG GATGCAGGTT CTGCCGGTAC GGCAAACTTT 
GATGCCTTCT ACCGAACGGT GATTTGCGCC AGCAAAGTTC GAATCAAAGC GTTTCTGACC 
GTGTCGCCGC CGGGCCAAAC CTGGTCACAA GAAAATTATG ATCCTGACAA TATTGATGAA 
AATAAGATCC ACGCGCTGTT TCGTCAGTAT CGCAACGTTC TTCAGGGATT AAAACTCAAG 
GTTCAGACTG AGGACATTGC TGAATATGGA TTAAAACCGC TGACTGAATC CCTTCGTATT 
GCCAACGATT TAAGGTGCCC CGTGGCAATA CACTCGACTC ATCCCGTCGT TCCCATGAAA 
GAACTTGTCT CCTTGCTACG CCGCGGCGAT ATTATCGCTC ATGCGTTTCA CGGCAAAGGT 
AGCACCATTC TTACTGATGA AGGCGCGGTC TTAGCCGAAG TCCGTCAGGC AAGGGAAAGA 
GGCGTTATAT TTGATGCCGC CAATGGTCGC AGCCATTTTT CAATGAACAC GGCACGCCGA 
GCCATCGCCA ATGGCTTTCT TCCGGATATC ATCAGTAGCG ATCTCTCAAC CATCACTAAA 
CTCGCCTGGC CTGTTTACGC CTTACCATGG ATTTTATCGA AATATTTAGC ACTCGGCGTC 
GCGCTTACCG ATGTCATTAA CGCCTGTACC CATACCCCAG CAGTTTTATT GGGCATGGCA 
GCAGAAATTG GTACGCTGGC CCCTGGGGCA TTTGCCGATA TCGCCATCTT TAAATTAAAA 
AACAGGCATG TTGAATTTGC CGATATTCAT GGTGAAACGC TCACGGGGAC GCATGTGCTG 
GTACCACAAA TGACCATAAA ATCCGGTGAG ATATTATTTC GTCAAATTGA TTTTGGCGCG 
CGGCCAAACG GAGTTGAAAA ATGA
 
Protein sequence
MMKNDILITG GHIIDPARNI NEINNLRIIN DIIVDADKYP VTSETRIIHA DGMIVTPGLI 
DYHAHVFYDA TEGGVRPDMY MPPNGVTTVV DAGSAGTANF DAFYRTVICA SKVRIKAFLT 
VSPPGQTWSQ ENYDPDNIDE NKIHALFRQY RNVLQGLKLK VQTEDIAEYG LKPLTESLRI 
ANDLRCPVAI HSTHPVVPMK ELVSLLRRGD IIAHAFHGKG STILTDEGAV LAEVRQARER 
GVIFDAANGR SHFSMNTARR AIANGFLPDI ISSDLSTITK LAWPVYALPW ILSKYLALGV 
ALTDVINACT HTPAVLLGMA AEIGTLAPGA FADIAIFKLK NRHVEFADIH GETLTGTHVL 
VPQMTIKSGE ILFRQIDFGA RPNGVEK