Gene SeD_A4787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4787 
SymbolrpsF 
ID6872691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4643062 
End bp4643457 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content53% 
IMG OID642787678 
Product30S ribosomal protein S6 
Protein accessionYP_002218272 
Protein GI198243986 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0360] Ribosomal protein S6 
TIGRFAM ID[TIGR00166] ribosomal protein S6 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.11072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCATT ACGAAATCGT TTTTATGGTC CATCCTGACC AGAGCGAACA GGTTCCGTGC 
ATGATCGAGC GTTACTCTGC TGCCATCACT GGCGCAGAAG GCAAGATCCA CCGTCTGGAA
GACTGGGGCC GCCGTCAGCT GGCTTACCCG ATCAACAAAC TGCACAAAGC GCACTACGTT
CTGATGAACG TTGAAGCGCC GCAGGAAGTG ATCGATGAGC TGGAAACTAC CTTCCGCTTC
AACGATGCCG TTATCCGCAG CATGGTTATG CGTACTAAGC ACGCTGTTAC CGAAGCTTCT
CCGATGGTTA AAGCGAAAGA CGAGCGCCGT GAGCGTCGCG ATGATTTCGC TAACGAAACC
GCAGATGATG CTGAAGCTGG GGATTCTGAA GAGTAA
 
Protein sequence
MRHYEIVFMV HPDQSEQVPC MIERYSAAIT GAEGKIHRLE DWGRRQLAYP INKLHKAHYV 
LMNVEAPQEV IDELETTFRF NDAVIRSMVM RTKHAVTEAS PMVKAKDERR ERRDDFANET
ADDAEAGDSE E