Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4785 |
Symbol | sgaE |
ID | 6873571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4641502 |
End bp | 4642188 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642787676 |
Product | L-ribulose-5-phosphate 4-epimerase |
Protein accession | YP_002218270 |
Protein GI | 198244675 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAGC TCAAGCAGCA GGTATTTGAC GCTAACATGG ATTTGCCCCG TTATGGACTG GTGACGTTTA CCTGGGGCAA CGTCAGCGCT ATCGATCGCG AACGCGGGCT GGTGGTGATT AAGCCAAGCG GTGTCGCCTA TGAAACCATG AAGGTAGATG ACATGGTGGT GGTGGATATG GATGGCAAAG TGGTGGAGGG AGGTTATCGT CCTTCTTCCG ATACCGCTAC CCATCTGGCG CTGTATCAAC GCTATCCGTC GCTTGGCGGC GTCGTTCATA CCCACTCCAC CCACGCCACG GCATGGGCGC AGGCGGGGAT GGCTATTCCG GCGCTCGGTA CCACGCACGC GGACTATTTC TTTGGCGATA TTCCTTGTAC CAGGGCGTTA AGCGAAGAAG AAGTGCAGGG CGAGTACGAG CTGAACACCG GTAAGGTGAT CATCGAAACG CTGGGCGAGG TGGAACCGCT GCATACGCCA GGCATTGTGG TGTATCAACA CGGGCCGTTC GCCTGGGGGA AAGATGCGCA CGATGCGGTA CATAACGCGG TCGTCATGGA GGAAGTGGCG CGAATGGCGT GGATTGCGCG CGGTATTAAC CCTGGCCTCA ACCCCATCGA CGATTATCTG ATGAATAAAC ACTTCATGCG TAAGCATGGC CCGAATGCGT ATTACGGGCA GAAGTGA
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Protein sequence | MQKLKQQVFD ANMDLPRYGL VTFTWGNVSA IDRERGLVVI KPSGVAYETM KVDDMVVVDM DGKVVEGGYR PSSDTATHLA LYQRYPSLGG VVHTHSTHAT AWAQAGMAIP ALGTTHADYF FGDIPCTRAL SEEEVQGEYE LNTGKVIIET LGEVEPLHTP GIVVYQHGPF AWGKDAHDAV HNAVVMEEVA RMAWIARGIN PGLNPIDDYL MNKHFMRKHG PNAYYGQK
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