| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4784 |
|---|
| Symbol | ulaE |
|---|
| ID | 6875419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 4640648 |
|---|
| End bp | 4641502 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642787675 |
|---|
| Product | L-xylulose 5-phosphate 3-epimerase |
|---|
| Protein accession | YP_002218269 |
|---|
| Protein GI | 198244201 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3623] Putative L-xylulose-5-phosphate 3-epimerase |
|---|
| TIGRFAM ID | [TIGR00542] hexulose-6-phosphate isomerase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.871942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 78 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTCGA AACAAATTCC GCTCGGCATC TATGAAAAAG CGCTCCCTGC CGGGGAGTGC
TGGCTGGAGC GCCTGCGGCT GGCGAAAACG CTGGGTTTTG ACTTTGTTGA AATGTCGGTG
GACGAGACCG ACGCCCGACT GGCGCGGCTC GACTGGAGTC GCGAGCAGCG CCTGGCGCTG
GTGAGCGCGG TTGCTGAAAC CGGCGTGCGC GTGCCGTCCA TGTGTCTGAG CGCGCATCGT
CGTTTTCCGC TCGGTAGCGA AGATGACGCG GTACGGGCGC AGGGGCTGGA GATTATGCGT
AAAGCGATTC AGTTTGCGCA GGACGTCGGG ATTCGCGTCA TTCAACTGGC GGGGTACGAC
GTTTACTATC AGCAGGCCAA TGACGAAACG CGTTGCCGCT TCCGCGATGG GTTAAAAGAG
AGCGTTGATA TGGCTAGCCG CGCCCAGGTG ACGCTGGCGA TGGAGATCAT GGATTATCCA
TTGATGAATT CCATCAGTAA AGCGCTGGGC TATGCTCACT ACCTCAATAA CCCGTGGTTC
CAGCTCTATC CGGATATCGG CAATCTGTCT GCCTGGGATA ACGACGTACA GATGGAGCTA
CAGGCGGGAA TCGGGCATAT CGTCGCGGTA CACGTCAAAG ATACTAAACC CGGCGTGTTC
AAAAATGTGC CGTTTGGCGA AGGCGTTGTC GATTTCGAAC GCTGCTTCGA AACGCTCAAA
CAGAGTGGCT ATTGCGGGCC CTATCTGATT GAGATGTGGA GTGAAACAGC AGAGAACCCG
GCGGCAGAGG TAGCGAAAGC GCGTGACTGG GTGAAAGCGC GCATGGCCAG CGCCGGTCTG
GTGGAGGCAG CCTAA
|
|---|
| Protein sequence | MLSKQIPLGI YEKALPAGEC WLERLRLAKT LGFDFVEMSV DETDARLARL DWSREQRLAL
VSAVAETGVR VPSMCLSAHR RFPLGSEDDA VRAQGLEIMR KAIQFAQDVG IRVIQLAGYD
VYYQQANDET RCRFRDGLKE SVDMASRAQV TLAMEIMDYP LMNSISKALG YAHYLNNPWF
QLYPDIGNLS AWDNDVQMEL QAGIGHIVAV HVKDTKPGVF KNVPFGEGVV DFERCFETLK
QSGYCGPYLI EMWSETAENP AAEVAKARDW VKARMASAGL VEAA
|
|---|
| |