Gene SeD_A4780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4780 
SymbolulaA 
ID6875606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4637782 
End bp4639179 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content53% 
IMG OID642787672 
ProductPTS system ascorbate-specific transporter subunit IIC 
Protein accessionYP_002218266 
Protein GI198244626 
COG category[S] Function unknown 
COG ID[COG3037] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.259071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCC TCTACAACAT CTTTACCATT TTTTTTAATC AGGTAATGAC CAATGCCCCG 
CTATTACTGG GTATTGTGAC CTGCCTGGGC TATATCCTGC TGCGTAAAAG CGTCAGCGTG
ATCATCAAAG GGACGATCAA AACCATCATT GGCTTCATGC TGCTACAGGC CGGGTCCGGC
ATTCTGACCA GCACCTTTAA ACCGGTGGTG GCGAAAATGT CTGAGGTCTA CGGCATCAAC
GGCGCGATTT CCGATACCTA TGCTTCGATG ATGGCAACGA TCGAACGGAT GGGTGATGCG
TATAGTTGGG TAGGCTACGC GGTGTTGCTC GCGCTGGCGC TGAATATTTG TTACGTCTTG
TTGCGACGCA TTACCGGTAT TCGCACCATC ATGTTGACCG GGCACATCAT GTTCCAGCAG
GCGGGGCTGA TTGCGGTCTC TTTCTATATC TTCGGCTATT CCATGTGGAC CACCATTATC
TGCACGGCGA TACTGGTTTC CCTGTACTGG GGTATTACCT CCAACATGAT GTACAAGCCG
ACTCAGGAAG TGACCGATGG CTGTGGTTTC TCCATCGGTC ACCAGCAGCA GTTTGCTTCC
TGGATTGCCT ATAAAGTCGC GCCGTTCCTG GGCAAAAAAG AGGAAAGCGT TGAAGACCTC
AAACTGCCGG GCTGGCTGAA CATTTTCCAT GACAACATCG TCTCCACGGC GATTGTAATG
ACCATCTTCT TTGGTGCCAT TCTGCTCTCC TTTGGTATCG ATACCGTACA GGCGATGGCG
GGTAAAACCC ACTGGACAAT CTATATCCTG CAAACCGGTT TCTCCTTTGC GGTGGCGATC
TTCATCATCA CCCAGGGCGT GCGTATGTTT GTCGCCGAGC TCTCTGAGGC CTTTAACGGT
ATCTCCCAGC GTCTGATTCC GGGCGCAGTA CTGGCGATTG ACTGCGCCGC TATTTATAGC
TTCGCGCCGA ACGCGGTGGT CTGGGGCTTT ATGTGGGGCA CCATCGGTCA GCTGATTGCG
GTTGGCATCC TGGTTGCCTG CGGCTCCTCG ATCCTGATTA TTCCTGGCTT TATCCCGATG
TTCTTCTCTA ACGCCACTAT CGGCGTGTTC GCTAACCACT TCGGCGGCTG GCGTGCGGCG
CTGAAGATTT GTCTGGTGAT GGGGATGATC GAAATCTTTG GTTGCGTCTG GGCGGTGAAA
CTCACGGGGA TGAGCGCCTG GATGGGTATG GCGGACTGGT CGATTCTGGC ACCTCCGATG
ATGCAGGGCT TCTTCTCCCT CGGTATCGCC TTTATGGCCG TCATCATTGT AATTGCACTG
GCTTATATGT TCTTCGCTGG CCGCGCACTG CGCGCAGAAG AAGATGCAGA AAAACAACTG
GCAGAACAGT CTGCTTAA
 
Protein sequence
MEILYNIFTI FFNQVMTNAP LLLGIVTCLG YILLRKSVSV IIKGTIKTII GFMLLQAGSG 
ILTSTFKPVV AKMSEVYGIN GAISDTYASM MATIERMGDA YSWVGYAVLL ALALNICYVL
LRRITGIRTI MLTGHIMFQQ AGLIAVSFYI FGYSMWTTII CTAILVSLYW GITSNMMYKP
TQEVTDGCGF SIGHQQQFAS WIAYKVAPFL GKKEESVEDL KLPGWLNIFH DNIVSTAIVM
TIFFGAILLS FGIDTVQAMA GKTHWTIYIL QTGFSFAVAI FIITQGVRMF VAELSEAFNG
ISQRLIPGAV LAIDCAAIYS FAPNAVVWGF MWGTIGQLIA VGILVACGSS ILIIPGFIPM
FFSNATIGVF ANHFGGWRAA LKICLVMGMI EIFGCVWAVK LTGMSAWMGM ADWSILAPPM
MQGFFSLGIA FMAVIIVIAL AYMFFAGRAL RAEEDAEKQL AEQSA