| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4764 |
|---|
| Symbol | nsrR |
|---|
| ID | 6871693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 4623053 |
|---|
| End bp | 4623541 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642787657 |
|---|
| Product | transcriptional repressor NsrR |
|---|
| Protein accession | YP_002218251 |
|---|
| Protein GI | 198243076 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0252301 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTGGCTGG TTTATCATCA ATATAAATGT ATTTTTCCCG TTTTCCCTTT TCCTGAGGTT
GATGTGCAGT TAACGAGTTT CACCGATTAC GGCTTACGTG CGCTAATCTA TATGGCGTCG
TTACCAGATG GACGAATGAC CAGCATTTCT GAGGTGACAG AAGTCTACGG CGTGTCCCGT
AATCATATGG TCAAAATTAT CAATCAGCTT AGCCGGGCGG GCTTTGTCAC CGCCGTTCGG
GGAAAAAATG GAGGTATCCG CCTGGGTAAA CCGGCTAATA CTATTTGTAT TGGCGATGTG
GTGCGTGAGC TGGAACCCTT ATCACTGGTC AACTGTAGCA GCGAATTTTG CCACATCACC
CCTGCCTGTC GTCTGAAACA GGCGCTTTCT AAGGCCGTGC AGAGTTTTCT CAAGGAGCTG
GATAACTACA CGCTTGCCGA TTTGGTTGAA GAGAATCAAC CGCTTTATAA ATTATTACTG
GTGGAGTGA
|
|---|
| Protein sequence | MWLVYHQYKC IFPVFPFPEV DVQLTSFTDY GLRALIYMAS LPDGRMTSIS EVTEVYGVSR
NHMVKIINQL SRAGFVTAVR GKNGGIRLGK PANTICIGDV VRELEPLSLV NCSSEFCHIT
PACRLKQALS KAVQSFLKEL DNYTLADLVE ENQPLYKLLL VE
|
|---|
| |