Gene SeD_A4757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4757 
SymbolmiaA 
ID6874774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4616058 
End bp4617008 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content55% 
IMG OID642787650 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_002218244 
Protein GI198242420 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATG TAAGCAAGGC GAGCCTGCCT AAGGCGATAT TTTTGATGGG GCCGACGGCC 
TCCGGCAAAA CGGCGCTGGC GATAGAACTG CGTAAAGTTT TGCCAGTAGA GTTGATAAGC
GTTGATTCCG CCCTCATTTA TCGGGGAATG GATATTGGCA CGGCTAAGCC GAATGCCGAT
GAGCTGAAAG CGGCGCCGCA TCGACTGCTG GATATACGCG ACCCGTCGCA GGCGTATTCG
GCGGCGGATT TTCGCCGCGA CGCGTTAGCG CAAATGGCGG AGATCACCGC TGCGGGGCGT
ATCCCGCTGT TAGTGGGCGG TACCATGCTG TATTTTAAGG CATTGCTGGA AGGGTTATCG
CCGCTGCCTT CAGCAGATCC GGAAGTCAGA TCCCGGATAG AGCAGCAAGC AGCGGAGCTT
GGATGGGAGG CGTTGCATCA GCAACTTCAG GAGATAGATC CGGTTGCCGC CGCGCGAATT
CATCCAAATG ATCCGCAAAG ACTTTCCCGG GCACTGGAAG TTTTTTTCAT TTCGGGTAAA
ACTTTAACGG AGCTAACGCA AACGTCAGGA GACGCGCTAC CGTACCAGGT GCATCAGTTC
GCTATCGCCC CGGCGAGCCG TGAACTGCTC CATCAGCGCA TTGAACTGCG TTTTCATCAG
ATGTTGGCTT CAGGTTTTGA AGCAGAAGTC CGGGCGCTTT TTGCCCGAGG AGATTTGCAT
ACGGACTTGC CTTCCATCCG TTGTGTGGGA TACCGCCAGA TGTGGTCATA CATTGAGGGC
GAAATCTCAT ATGATGAAAT GGTTTATAGA GGTGTTTGCG CCACGAGACA GTTGGCGAAG
CGCCAGATGA CCTGGTTGCG CGGTTGGGAG GGGGTGCGCT GGCTTGACAG TGAGAATCCC
GATCGGGCGC GAAAAGAAGT ATTACAGGTT GTTGGTGCTA TCGCAGACTG A
 
Protein sequence
MNDVSKASLP KAIFLMGPTA SGKTALAIEL RKVLPVELIS VDSALIYRGM DIGTAKPNAD 
ELKAAPHRLL DIRDPSQAYS AADFRRDALA QMAEITAAGR IPLLVGGTML YFKALLEGLS
PLPSADPEVR SRIEQQAAEL GWEALHQQLQ EIDPVAAARI HPNDPQRLSR ALEVFFISGK
TLTELTQTSG DALPYQVHQF AIAPASRELL HQRIELRFHQ MLASGFEAEV RALFARGDLH
TDLPSIRCVG YRQMWSYIEG EISYDEMVYR GVCATRQLAK RQMTWLRGWE GVRWLDSENP
DRARKEVLQV VGAIAD