Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4755 |
Symbol | |
ID | 6873044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4612877 |
End bp | 4614199 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642787648 |
Product | N-acetylmuramoyl-l-alanine amidase II |
Protein accession | YP_002218242 |
Protein GI | 198243078 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTATC GCATCAAAAA TGCCGTAATA GCAGCCTTAA TCCTGCTGTG CGCGCAGGCG GGCGCCGCCA GTCTCTCTGA TATTCAGGTG TCCAACGGCG AGCAGCAGGC GCGCATTACG CTGAGTTTTA TCGGCGAGCC GGAATATGCT TACTCACAGG ACGGTAAACG TACCGTGGCG CTGGATATCA GGCAGACCGG CGTGATTCAG GGGCTGCCGC TTCAGTTTAG CGGTAACAAT CTGGTAAAAA CGATCCGTGC CGGAACGCCG AAAGATGCGC AATCTTTACG GTTGCTTGTC GATCTGACGG AAAATGGTAA AACCGAGGCG GTGAAGCGGC AAAACGGCGG CAACTATACG GTCATTTTCA CCATTAATGC CGATGTTCCG CCGCCGCCAC CACCGCCTGT CGTCGCGAAA CGGGTTGAAA GCGCACCCCG CCCGACGGAG CCTGCCCGTA ATCCGTTTAA ATCTTCTGAT GATCGCCTGA CCGGCGTAAC CAGCAGCAAT ACCGTTACGC GGCCTGCGGC GCGCGCGTCG GCAGGCGCTG GCGATAAAGT GGTGATTGCT ATTGATGCCG GACATGGAGG CCAGGACCCC GGCGCGATAG GCCCGGGCGG TACGCGCGAG AAAAATGTCA CCATCGCTAT CGCGCGTAAG TTACGCACAT TGCTGAATAA CGATCCGATG TTTAAAGGCG TGCTGACGCG TGACGGCGAC TATTTTATTT CGGTGATGGG GCGGTCTGAC GTGGCGCGTA AGCAAAACGC CAACTTCCTT GTCTCTATTC ATGCGGATGC CGCGCCAAAT CGTGACGCCA CCGGCGCCTC CGTCTGGGTA TTGTCCAATC GTCGCGCGAA CAGCGAAATG GCAAACTGGC TTGAGCAGCA TGAGAAGCAA TCCGAACTGT TAGGCGGCGC TGGCGATGTG CTGGCGAACA GTCAGTCAGA CCCTTATCTG AGCCAGGCGG TACTGGATTT GCAATTCGGT CATTCGCAGC GGGTAGGGTA TGATGTGGCG ACGAACGTGC TAAGCCAACT CGACGGCGTG GGGTCGCTGC ATAAACGTCG CCCGGAACAC GCTAGCCTGG GCGTGTTGCG TTCGCCGGAT ATCCCGTCCA TTTTGGTGGA GACGGGCTTT ATCAGTAATC ACGGCGAAGA GCGATTGCTG GCGAGCGACC GCTATCAGCA GCAGATTGCT GACGCTATAT ACCGGGGGTT GCGTAAGTAC TTTGCAGCGC ATCCGATCCA GTCTGCGCCG CAGGGCGGCC CAGGCCAGAC GGCCAGTACC AACCAGCCTG GCGCCATAAC CGCCGCGAAT TAA
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Protein sequence | MIYRIKNAVI AALILLCAQA GAASLSDIQV SNGEQQARIT LSFIGEPEYA YSQDGKRTVA LDIRQTGVIQ GLPLQFSGNN LVKTIRAGTP KDAQSLRLLV DLTENGKTEA VKRQNGGNYT VIFTINADVP PPPPPPVVAK RVESAPRPTE PARNPFKSSD DRLTGVTSSN TVTRPAARAS AGAGDKVVIA IDAGHGGQDP GAIGPGGTRE KNVTIAIARK LRTLLNNDPM FKGVLTRDGD YFISVMGRSD VARKQNANFL VSIHADAAPN RDATGASVWV LSNRRANSEM ANWLEQHEKQ SELLGGAGDV LANSQSDPYL SQAVLDLQFG HSQRVGYDVA TNVLSQLDGV GSLHKRRPEH ASLGVLRSPD IPSILVETGF ISNHGEERLL ASDRYQQQIA DAIYRGLRKY FAAHPIQSAP QGGPGQTAST NQPGAITAAN
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