Gene SeD_A4725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4725 
Symbol 
ID6874852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4585770 
End bp4587032 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content51% 
IMG OID642787620 
Productinner membrane protein YjeH 
Protein accessionYP_002218217 
Protein GI198242056 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.201688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCGG ATAATGAGCT GATGAATGAA CTAAAAAAAG AGCTTGGGTT GGTTCAGGGC 
GTTATCTTGT TAACCACATC ATTATTAGGG ACTGGCGTTT TTGCGCTTCC GGAGCTGGCT 
GCGCTGGCGG CAGGCGACAT CAGCCTTTGG GCATGGCCGC TGCTCATTAT TTTGATTTTC 
CCTATTGCGA TTGTCTTTGC TGTGCTGGGG CGCCATTTTC CACACGCTGG CGGCGTAGCG 
CATTTTGTCG GGATGGCATT TGGCCCGCGT CTGCAACGGG TGATCAGTTG GCTGTTTTTA 
TCAGTCATTC CTGTTAGTTT TCCCGCAGCC TTGCATATTG CGGTGGGTTT CGGCCAGGCG 
CTGTTTGGCT GGCAAAGCGA ACAGCTCTTA TTTGGGGAGC TGGGTACTCT AGGTTTGCTA 
TGGTTTATGG GATCGCGCGG CGCCAGCTCC AGCGCCAACC TGCAAGCCAT TATCGCTGGA 
TTAATTATCG CGCTTATTGC CGCCATTCTG TGGAAAGGCG CGATTAAACC TGCGGATATC 
ACCTTCCCAG CCGCAAACGA AATCACCTTT TCCCGGCTGT GTACCGCCCT GGCGATCATG 
TTCTGGGGAT TTGTGGGAAT TGAGGCGTTT ACGCATTTGT CGTCTGAATT TAAAAATCCT 
GAACGTGATT TTCCGCGCGC ATTGATCATT GGCCTGATGC TGGCCGGCTC CATTTATTGG 
ACCTGTACCG CCGTGGTGCT GCATTTTGGC GTCTATAGCG ACAAGATAGC GGCAACAGCA 
TCGCTACCGC TTATTATTGT TCATCTCTTC GGTATCCAGG CGTTGTGGAT AGCCTGCATT 
ATTGGTTATC TCACCTGCTT TGCCAGCCTG AATGTGTATG CTCAGAGTTT TGCGCGTCTG 
ATATGGACGC AAATGCAATA TCAGCCCGAT CACTATCTGG CTCAACTCTC TCCCGGGCGC 
CTTCCCTTGC ACGCGTTAAA CGTTATTCTG GCCTGTTGTT GCGTGAGTTC CCTGGTCGTC 
TACGCCCTGA AGATTAACCT CAATGCGCTG ATCGTCTATG CTAACGGTAT TTTTATTATG 
CTCTATCTGC TTTGTATGCT GGCGGGCTGT CGACTATTGA AAGGGCGCTG CTATGCACTG 
GCGGTGACGG GTTGTCTACT GTGCCTGTTA TTGCTGGTAA TGCTGGGGTG GAAAAGCTTA 
TATGCCATTA TCATGCTGGC AGCATTATGG CTGTTTTTAC CGAAGCGAAA ACGCATGGCG 
TAA
 
Protein sequence
MPPDNELMNE LKKELGLVQG VILLTTSLLG TGVFALPELA ALAAGDISLW AWPLLIILIF 
PIAIVFAVLG RHFPHAGGVA HFVGMAFGPR LQRVISWLFL SVIPVSFPAA LHIAVGFGQA 
LFGWQSEQLL FGELGTLGLL WFMGSRGASS SANLQAIIAG LIIALIAAIL WKGAIKPADI 
TFPAANEITF SRLCTALAIM FWGFVGIEAF THLSSEFKNP ERDFPRALII GLMLAGSIYW 
TCTAVVLHFG VYSDKIAATA SLPLIIVHLF GIQALWIACI IGYLTCFASL NVYAQSFARL 
IWTQMQYQPD HYLAQLSPGR LPLHALNVIL ACCCVSSLVV YALKINLNAL IVYANGIFIM 
LYLLCMLAGC RLLKGRCYAL AVTGCLLCLL LLVMLGWKSL YAIIMLAALW LFLPKRKRMA