Gene SeD_A4686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4686 
Symbol 
ID6872836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4547387 
End bp4548466 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content55% 
IMG OID642787585 
Productsensor protein BasS/PmrB 
Protein accessionYP_002218183 
Protein GI198244901 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.103767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTGA TGCGTTTTCA GCGAAGAGCG ATGCCCCTTC GCCAGCGTTT AATGCTGACA 
ATTGGTCTTA TTCTGCTGGT GTTCCAGTTA ATCAGTACCT TCTGGTTATG GCATGAAAGC 
ACTGAGCAAA TCCAATTGTT CGAGCAGGCG CTGCGGGATA ATCGCAATAA CGATCGCCAT 
ATCATGCACG AAATTCGCGA GGCGGTCGCC AGCCTGATCG TCCCCGGCGT ATTTATGGTT 
AGCCTGACGC TGCTAATTTG TTACCAGGCG GTACGGCGTA TTACCCGTCC GCTCGCCGAA 
CTGCAAAAAG AGCTGGAAGC GCGGACGGCG GATAATCTGG CGCCGATCGC CATTCACAGC 
TCCACGCTTG AGATTGAGTC CGTCGTCTCG GCGATCAATC AACTGGTTAC GCGTTTGACC 
ACCACGCTCG ACAATGAACG CCTTTTTACC GCCGATGTGG CCCATGAGCT ACGCACGCCG 
CTGTCGGGGG TGCGTTTGCA TCTGGAATTA TTGTCAAAAA CCCACAATGT TGATGTCGCG 
CCGCTTATCG CCCGTCTTGA CCAGATGATG GATAGCGTCT CCCAGCTTCT GCAACTGGCG 
CGCGTGGGCC AGTCATTCTC TTCCGGGAAT TATCAGGAAG TAAAACTGCT GGAAGATGTG 
ATCCTCCCCT CCTACGATGA GCTGAACACC ATGCTGGAAA CGCGCCAGCA AACTCTGTTG 
CTGCCGGAAA GCGCGGCGGA CGTGGTGGTG CGCGGTGACG CGACATTACT GCGTATGCTG 
TTGCGAAATC TGGTGGAAAA CGCGCATCGC TATAGCCCTG AAGGAACCCA TATCACTATC 
CACATTAGCG CCGACCCCGA CGCTATTATG GCGGTCGAAG ACGAGGGGCC GGGTATTGAT 
GAAAGCAAAT GCGGGAAGCT AAGCGAAGCG TTCGTGCGGA TGGACAGCCG TTATGGCGGA 
ATTGGCCTGG GGCTGAGTAT CGTCAGCCGC ATCACCCAAC TACATCAGGG ACAGTTTTTC 
CTGCAAAACC GTACGGAAAG AACAGGCACC CGTGCCTGGG TGCTGTTGAA AAAGGCATAA
 
Protein sequence
MSLMRFQRRA MPLRQRLMLT IGLILLVFQL ISTFWLWHES TEQIQLFEQA LRDNRNNDRH 
IMHEIREAVA SLIVPGVFMV SLTLLICYQA VRRITRPLAE LQKELEARTA DNLAPIAIHS 
STLEIESVVS AINQLVTRLT TTLDNERLFT ADVAHELRTP LSGVRLHLEL LSKTHNVDVA 
PLIARLDQMM DSVSQLLQLA RVGQSFSSGN YQEVKLLEDV ILPSYDELNT MLETRQQTLL 
LPESAADVVV RGDATLLRML LRNLVENAHR YSPEGTHITI HISADPDAIM AVEDEGPGID 
ESKCGKLSEA FVRMDSRYGG IGLGLSIVSR ITQLHQGQFF LQNRTERTGT RAWVLLKKA