| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4674 |
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| Symbol | nrfD |
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| ID | 6870961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 4534337 |
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| End bp | 4535293 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642787575 |
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| Product | cytochrome c nitrite reductase, NrfD subunit |
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| Protein accession | YP_002218173 |
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| Protein GI | 198243527 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | [TIGR03148] cytochrome c nitrite reductase, NrfD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCCG CTTCTGCATT TCATTTTGCA TCACTGGTGT GGGACTGGCC CATCGCCATC
TATCTGTTTC TGATTGGCAT CTCCGCCGGA CTGGTTACGT TGGCGATTCT GCTGCGCCGC
TTCCATCCGG AGGCGGGCGG TTCGGACAGC ACGCTGCTGC GCACTACGCT GGTGTTAGGG
CCGGGGGCGA TTATCTTCGG TCTGCTGATT CTGGTCTTTC ACCTGACGCG CCCGTGGACC
TTCTGGAAGC TGATGTTCCA CTACAGCTTT ACCTCGGTGA TGTCGATGGG GGTGATGCTG
TTCCAGTTGT ACATGGTAGT GCTGGTGCTG TGGCTGGCGA AAATCTTTGA AAAAGAGGTG
ATTGCCCTGC AGCAGCGTTG GCTGCCGCGG TTAGAGATCG TGCAGAAAGT GTTGGCGCTA
ATAACGCCGT TTCATCGCGC GCTGGAGACG TTAATGCTGG TGCTGGCGGT CCTGCTCGGG
GCGTACACCG GCTTTCTGCT GTCGGCGCTG AAATCCTATC CGTTCCTGAA TAACCCGATC
CTGCCGGCGC TGTTCCTGTT CTCCGGCATC TCCTCCGGCG CGGCGGTGGC GCTGATCGCT
ATGGCGTTAC GCCATCGTAG CAACCCGCAC AGCACCGAGG CGCGCTTTGT ACATCGCATG
GAAACCCCAG TGGTATGGCT GGAGATCTTC CTGCTGGCGG CCTTTTTTAT CGGGCTGGCG
CTGGGCGATG ACGGCAAAAT GCGCGCGCTG GCGGCGGCGC TGGGCGGCGG ATTCTGGAGC
TGGTGGTTCT GGCTTGGCGT CGTAGGGCTG GGATTGATTA TCCCGCTGCT GCTGAAACCC
TGGGCAAATC GTAGCGTCAC GTTTCACGGC GTGCTGGCCG TTTGCGGCGC CAGTTTGACC
GGCGTGCTGT TGCTGCGCTT TTTCATTCTT TATGCGGGAC AGCTAACGGT TGCATAA
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| Protein sequence | MTSASAFHFA SLVWDWPIAI YLFLIGISAG LVTLAILLRR FHPEAGGSDS TLLRTTLVLG
PGAIIFGLLI LVFHLTRPWT FWKLMFHYSF TSVMSMGVML FQLYMVVLVL WLAKIFEKEV
IALQQRWLPR LEIVQKVLAL ITPFHRALET LMLVLAVLLG AYTGFLLSAL KSYPFLNNPI
LPALFLFSGI SSGAAVALIA MALRHRSNPH STEARFVHRM ETPVVWLEIF LLAAFFIGLA
LGDDGKMRAL AAALGGGFWS WWFWLGVVGL GLIIPLLLKP WANRSVTFHG VLAVCGASLT
GVLLLRFFIL YAGQLTVA
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