Gene SeD_A4645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4645 
Symbol 
ID6871762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4486984 
End bp4487400 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content52% 
IMG OID642787547 
Producthypothetical protein 
Protein accessionYP_002218145 
Protein GI198242973 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.462887 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTATC AGCGCACCAT TACACTGAGC GAGAAGCCGC GCGGGTTTCA TCTGATAACA 
GATGAAATTA TCGATAAATT GTCTGGCTTA CCGCCTGTCG AAACGGGTTT GCTGCATCTG
TTGTTGCTAC ATACCTCGGC CTCGCTGACG CTAAACGAAA ACTGCGATCC CACCGTGCGC
GCTGATATGG AGCGCCATTT CCTGAAAACC GTTCCCGATA ATGCGGCGTA TGAACATGAC
TACGAAGGCG CGGATGACAT GCCTTCGCAT ATTAAGTCGT CAGTATTGGG CGTCTCGTTG
CTGCTGCCTG TACGCCAGGG GCGTTTACAG TTAGGAACAT GGCAAGGTAT CTGGTTGGGA
GAGCACCGTA TTCACGGCGG TCCACGTAAA ATCATCGCGA CACTACAAGG GGAATGA
 
Protein sequence
MWYQRTITLS EKPRGFHLIT DEIIDKLSGL PPVETGLLHL LLLHTSASLT LNENCDPTVR 
ADMERHFLKT VPDNAAYEHD YEGADDMPSH IKSSVLGVSL LLPVRQGRLQ LGTWQGIWLG
EHRIHGGPRK IIATLQGE