Gene SeD_A4635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4635 
Symbol 
ID6872646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4477259 
End bp4477774 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content56% 
IMG OID642787538 
Productzinc uptake transcriptional repressor 
Protein accessionYP_002218136 
Protein GI198244413 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.292781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA CCACAACGCA AGAGTTACTG GCGCAAGCTG AAAAACTCTG CGCGCAGCGC 
AACGTGCGCC TGACGCCTCA GCGCCTCGAA GTGCTGCGCC TGATGAGTCT GCAACAGGGT
GCCATCAGCG CATACGATTT GCTCGATTTG CTGCGCGAAA CGGAACCACA GGCCAAACCG
CCCACCATTT ACCGCGCGCT GGATTTTTTG CTCGAACAGG GTTTTGTCCA TAAAGTGGAA
TCCACCAATA GTTATGTGGT TTGCCACCTG TTCGACCAGC CGACGCACAG CTCGGCCATG
TTTATCTGCG ATCGTTGCGG CGTGGTGAAG GAAGAGTGTG CCGAGGGCGT GGAAGACATC
ATGCATACGC TGGCGGCTAA AATGGGATTT GCGCTACGAC ATAACGTTAT TGAGGCGCAC
GGTCTGTGCC CTGCGTGCGT AGAAGTGGAA GCGTGTCGCC ATCCGGGCGA CTGTGGTCAC
GATCACTCGG TGCTGGTGAA GAAAAAACCG CGTTAG
 
Protein sequence
MEKTTTQELL AQAEKLCAQR NVRLTPQRLE VLRLMSLQQG AISAYDLLDL LRETEPQAKP 
PTIYRALDFL LEQGFVHKVE STNSYVVCHL FDQPTHSSAM FICDRCGVVK EECAEGVEDI
MHTLAAKMGF ALRHNVIEAH GLCPACVEVE ACRHPGDCGH DHSVLVKKKP R