| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4599 |
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| Symbol | metH |
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| ID | 6874560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 4438387 |
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| End bp | 4442070 |
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| Gene Length | 3684 bp |
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| Protein Length | 1227 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642787503 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_002218101 |
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| Protein GI | 198242630 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.972582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGCA AAGTTGAACA ACTGCGTGCG CAGTTAAATG AACGTATTCT GGTGCTGGAC
GGCGGTATGG GCACCATGAT CCAGAGCTAT CGTCTACATG AAGAAGATTT CCGCGGGGAG
CGCTTTGCCG ACTGGCCCTG CGACCTGAAA GGCAACAATG ACCTGCTGGT ACTCAGCAAG
CCGGAGGTGA TCGCCGCTAT CCACAACGCC TACTTTGAGG CTGGCGCGGA TATCATCGAA
ACCAACACCT TTAACTCGAC AACCATTGCG ATGGCGGATT ACCGGATGGA ATCCCTGTCG
GCGGAAATCA ACTATGCGGC GGCCAAACTG GCGCGCGCCT GCGCCGATGA ATGGACGGCG
CGAACACCAG AAAAACCACG TTTTGTTGCG GGCGTGCTTG GTCCAACTAA CCGCACGGCC
TCCATTTCGC CGGACGTCAA CGACCCGGCG TTTCGTAATA TCACCTTCGA TCAGCTGGTG
GCGGCCTACC GTGAATCCAC CAAAGCGCTG GTGGAAGGCG GGGCGGACCT GATCCTGATT
GAAACCGTCT TTGACACCCT GAATGCGAAA GCGGCGGTGT TTGCGGTGAA AGAAGAGTTT
GAAGCGCTGG GCGTTGATCT GCCGATCATG ATTTCCGGCA CCATCACCGA CGCCTCTGGT
CGTACCCTCT CCGGCCAGAC GACCGAAGCC TTTTATAACT CGCTGCGCCA CGCCGAGGCG
CTCACTTTTG GCCTTAACTG CGCGCTGGGG CCTGATGAGC TGCGCCAGTA CGTCCAGGAA
CTGTCGCGGA TTGCCGAATG CTACGTCACC GCGCACCCGA ACGCCGGCCT GCCGAACGCT
TTCGGCGAGT ACGACCTCGA CGCCGACACC ATGGCGAAAC AGATTCGCGA ATGGGCGGAA
GCGGGCTTCC TGAATATCGT TGGCGGCTGC TGTGGCACTA CGCCGGAGCA TATCGCCGCC
ATGAGCCGCG CCGTTGCCGG TTTGCTGCCG CGCCAGCTGC CGGATATCCC GGTCGCCTGC
CGCCTTTCCG GCCTGGAGCC GCTGAACATT GGTGACGATA GCCTGTTTGT GAACGTCGGC
GAACGTACTA ACGTCACCGG CTCGGCCAAA TTTAAACGGC TGATCAAAGA AGAGAAATAC
AGCGAAGCGC TGGATGTCGC CCGTCAGCAG GTAGAAAGCG GCGCGCAGAT TATTGATATC
AATATGGATG AGGGGATGCT CGACGCCGAA GCGGCGATGG TGCGTTTCCT CAGCCTGATT
GCCGGTGAGC CGGACATTGC CCGTGTACCA ATCATGATCG ACTCCTCCAA ATGGGAGGTT
ATCGAAAAAG GGCTGAAGTG CATTCAGGGT AAAGGCATCG TCAACTCTAT TTCGATGAAA
GAGGGCGTGG AAGCCTTTAT TCATCATGCG AAGTTGCTAC GTCGCTATGG CGCCGCAGTG
GTGGTGATGG CCTTTGATGA GCAGGGGCAG GCCGATACCC GCGCGCGTAA AATCGAAATT
TGCCGCCGAG CCTACAAAAT TCTCACCGAA GAGGTGGGTT TCCCGCCGGA AGACATCATC
TTCGACCCGA ATATCTTCGC CGTGGCGACC GGTATTGAAG AGCACAACAA CTACGCGCAG
GACTTTATCG GCGCTTGCGA AGACATCAAA CGCGAGCTGC CGCACGCGCT GATCTCCGGC
GGCGTGTCTA ACGTGTCCTT CTCGTTCCGC GGCAACGACC CGGTACGTGA GGCTATCCAC
GCGGTATTCC TCTACTACGC CATCCGCAAT GGCATGGACA TGGGCATCGT CAACGCCGGA
CAGCTGGCGA TTTATGACGA CCTGCCTGCC GAACTGCGCG ATGCAGTTGA AGATGTCATT
CTTAACCGTC GCGATGACGG CACCGAGCGT TTGCTGGATT TGGCGGAGAA ATACCGCGGC
AGCAAAACCG ACGAAGCTGC CAACGCCCAG CAGGCGGAAT GGCGTAGCTG GGACGTGAAA
AAGCGTCTCG AATACTCGCT GGTGAAAGGC ATCACCGAAT TTATCGAACA GGATACCGAA
GAAGCCCGTC AGCAGGCCGC CCGCCCGATT GAGGTGATTG AAGGGCCGTT GATGGACGGC
ATGAACGTGG TCGGCGACCT GTTCGGCGAA GGGAAAATGT TCCTGCCGCA GGTGGTGAAA
TCCGCTCGCG TGATGAAACA AGCGGTGGCC TACCTGGAGC CGTTTATTGA AGCCAGCAAA
GAAAAAGGCT CCAGCAACGG CAAGATGGTG ATCGCCACCG TGAAGGGCGA TGTGCACGAT
ATTGGTAAAA ATATCGTTGG CGTGGTGCTG CAATGTAACA ACTACGAAAT CGTCGATCTT
GGCGTGATGG TGCCAGCGGA GAAAATCCTC AGAACGGCGC GTGAAGTGAA TGCCGATCTG
ATCGGTCTTT CCGGGCTTAT CACCCCGTCG CTGGACGAAA TGGTCAACGT GGCGAAAGAG
ATGGAGCGTC AGGGCTTTAC TATCCCGCTA CTGATCGGCG GCGCAACCAC TTCGAAAGCG
CATACGGCGG TGAAAATCGA GCAGAACTAC AGCGGTCCGA CGGTCTACGT GCAGAATGCT
TCGCGTACCG TGGGCGTGGT GGCGGCGCTA CTCTCCGACA ACCAGCGCGA TGACTTTGTC
GCCCGTACCC GCAAAGAGTA CGAAACCGTG CGTATTCAGC ACGCCCGCAA AAAACCGCGT
ACGCCGCCGG TCACGCTGGA AGCGGCGCGC GATAATGATC TGGCATTCGA TTGGGAACGC
TACACCCCGC CGGTAGCCCA CCGTCTGGGC GTGCAGGGGG TGGAAGCCAG CATCGAAACT
CTGCGCAACT ACATCGACTG GACGCCGTTC TTTATGACCT GGTCGCTGGC CGGCAAATAC
CCGCGCATTC TGGAAGATGA GGTGGTGGGC GTTGAGGCGC AGCGTCTGTT TAAAGACGCC
AATGATATGC TGGATAAACT CAGCGCCGAG AAGCTGTTGA ATCCGCGTGG CGTGGTGGGC
CTGTTCCCGG CTAACCGTGT GGGTGACGAC ATCGAAATCT ATCGCGACGC AACCCGTACT
CATGTTCTGA CGGTCAGCCA CCACCTGCGC CAGCAGACCG AGAAAGTCGG TTTTGCCAAC
TACTGTCTGG CGGATTTTGT CGCGCCGAAA CTGAGCGGCA AAGCGGATTA CATCGGTGCT
TTCGCGGTGA CCGGCGGTCT GGAGGAGGAT GCGCTGGCGG ACGCCTTCGA AGCGCAACAC
GACGACTATA ACAAGATCAT GGTGAAAGCG ATTGCCGACC GTCTGGCGGA AGCGTTTGCC
GAGTATCTGC ATGAGCGTGT ACGTAAGGTT TACTGGGGAT ATGCGCCGAA CGAGAGCCTG
AGTAACGACG AATTAATCCG CGAAAACTAC CAGGGGATTC GCCCGGCGCC GGGTTATCCT
GCCTGCCCGG AACATACCGA AAAAGGCACT ATCTGGCAGC TACTGGATGT CGAAAAACAC
ACCGGGATGA AGCTCACCGA ATCTTTCGCC ATGTGGCCTG GCGCGTCGGT CTCCGGCTGG
TACTTCAGCC ATCCTGAGAG CAAATACTTC GCGGTAGCGC AGATCCAACG CGATCAGGTG
ACAGATTATG CTTTCCGTAA AGGAATGAGC GTTGAGGACG TTGAGCGGTG GCTGGCGCCG
AACCTGGGGT ACGATGCGGA CTGA
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| Protein sequence | MSSKVEQLRA QLNERILVLD GGMGTMIQSY RLHEEDFRGE RFADWPCDLK GNNDLLVLSK
PEVIAAIHNA YFEAGADIIE TNTFNSTTIA MADYRMESLS AEINYAAAKL ARACADEWTA
RTPEKPRFVA GVLGPTNRTA SISPDVNDPA FRNITFDQLV AAYRESTKAL VEGGADLILI
ETVFDTLNAK AAVFAVKEEF EALGVDLPIM ISGTITDASG RTLSGQTTEA FYNSLRHAEA
LTFGLNCALG PDELRQYVQE LSRIAECYVT AHPNAGLPNA FGEYDLDADT MAKQIREWAE
AGFLNIVGGC CGTTPEHIAA MSRAVAGLLP RQLPDIPVAC RLSGLEPLNI GDDSLFVNVG
ERTNVTGSAK FKRLIKEEKY SEALDVARQQ VESGAQIIDI NMDEGMLDAE AAMVRFLSLI
AGEPDIARVP IMIDSSKWEV IEKGLKCIQG KGIVNSISMK EGVEAFIHHA KLLRRYGAAV
VVMAFDEQGQ ADTRARKIEI CRRAYKILTE EVGFPPEDII FDPNIFAVAT GIEEHNNYAQ
DFIGACEDIK RELPHALISG GVSNVSFSFR GNDPVREAIH AVFLYYAIRN GMDMGIVNAG
QLAIYDDLPA ELRDAVEDVI LNRRDDGTER LLDLAEKYRG SKTDEAANAQ QAEWRSWDVK
KRLEYSLVKG ITEFIEQDTE EARQQAARPI EVIEGPLMDG MNVVGDLFGE GKMFLPQVVK
SARVMKQAVA YLEPFIEASK EKGSSNGKMV IATVKGDVHD IGKNIVGVVL QCNNYEIVDL
GVMVPAEKIL RTAREVNADL IGLSGLITPS LDEMVNVAKE MERQGFTIPL LIGGATTSKA
HTAVKIEQNY SGPTVYVQNA SRTVGVVAAL LSDNQRDDFV ARTRKEYETV RIQHARKKPR
TPPVTLEAAR DNDLAFDWER YTPPVAHRLG VQGVEASIET LRNYIDWTPF FMTWSLAGKY
PRILEDEVVG VEAQRLFKDA NDMLDKLSAE KLLNPRGVVG LFPANRVGDD IEIYRDATRT
HVLTVSHHLR QQTEKVGFAN YCLADFVAPK LSGKADYIGA FAVTGGLEED ALADAFEAQH
DDYNKIMVKA IADRLAEAFA EYLHERVRKV YWGYAPNESL SNDELIRENY QGIRPAPGYP
ACPEHTEKGT IWQLLDVEKH TGMKLTESFA MWPGASVSGW YFSHPESKYF AVAQIQRDQV
TDYAFRKGMS VEDVERWLAP NLGYDAD
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