Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4593 |
Symbol | aceA |
ID | 6871441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4433720 |
End bp | 4435024 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642787498 |
Product | isocitrate lyase |
Protein accession | YP_002218096 |
Protein GI | 198243862 |
COG category | [C] Energy production and conversion |
COG ID | [COG2224] Isocitrate lyase |
TIGRFAM ID | [TIGR01346] isocitrate lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 90 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACCC GTACTCAACA AATCGAAGAA TTACAGAAAG AGTGGACACA ACCGCGCTGG GAAGGCATCA CCCGCCCGTA CAGCGCGGAG GAGGTGGTGA AATTACGCGG CTCGGTTAAC CCGGAATGCA CGCTGGCGCA GCTCGGCGCA GCGAAAATTT GGCGGCTGTT GCACGGTGAA GCGAAAAAAG GCTATATCAA CAGCCTTGGC GCGCTGACTG GCGGTCAGGC GTTGCAGCAG GCGAAAGCCG GTATTGAGGC GATTTATCTT TCAGGCTGGC AGGTAGCGGC AGATGCCAAC CTGGCATCCA GCATGTATCC GGATCAATCG TTGTACCCGG CAAACTCTGT TCCGGCGGTA GTGGATCGGA TCAACAACAC TTTTCGTCGT GCAGATCAGA TCCAGTGGGC ATCCGGTATT GAACCCAATG ATCCGCGCTA TGTGGATTAC TTCCTGCCGA TCGTTGCTGA TGCGGAAGCC GGTTTTGGCG GCGTTCTGAA TGCCTTCGAA CTGATGAAAT CGATGATTGA AGCCGGTGCA GCGGCCGTTC ACTTCGAAGA TCAGCTGGCG TCGGTGAAGA AATGCGGCCA TATGGGCGGC AAGGTGCTGG TCCCCACGCA GGAAGCGATT CAGAAACTGG TTGCTGCGCG TCTGGCCGCT GATGTGATGG GTGTCCCGAC GCTGGTGATT GCGCGTACCG ATGCGGATGC GGCAGATCTG ATTACTTCCG ACTGCGATCC CTATGACAGC GGTTTTATTA CCGGCGAACG CACCAGCGAA GGTTTCTACC GCACCCATGC GGGCATTGAG CAGGCGATCA GCCGCGGTCT GGCGTATGCC CCGTATGCCG ATCTGGTATG GTGCGAAACT TCTACGCCGG ATCTCGAATT GGCGCGTCGT TTTGCCGATG CTATCCACGC GAAGTATCCG GGCAAACTGC TGGCCTATAA CTGTTCGCCA TCCTTCAACT GGCAGAAGAA TCTGGACGAC AAGACCATTG CCAGCTTCCA GCAGCAGTTG TCGGACATGG GTTACAAATA CCAGTTTATT ACCCTGGCGG GCATCCACAG CATGTGGTTC AACATGTTCG ACCTGGCGCA TGCATACGCG CAGGGTGAGG GTATGAAACA CTATGTTGAG AAGGTTCAAC AACCCGAGTT CGCCGCGGCG AAAGACGGCT ACACCTTTGT TTCCCACCAG CAGGAAGTGG GCACTGGTTA CTTCGACAAA GTCACCACCA TTATTCAGGG CGGCGCGTCA TCCGTTACCG CGTTAACGGG TTCCACCGAA GAAGCGCAGT TTTGA
|
Protein sequence | MKTRTQQIEE LQKEWTQPRW EGITRPYSAE EVVKLRGSVN PECTLAQLGA AKIWRLLHGE AKKGYINSLG ALTGGQALQQ AKAGIEAIYL SGWQVAADAN LASSMYPDQS LYPANSVPAV VDRINNTFRR ADQIQWASGI EPNDPRYVDY FLPIVADAEA GFGGVLNAFE LMKSMIEAGA AAVHFEDQLA SVKKCGHMGG KVLVPTQEAI QKLVAARLAA DVMGVPTLVI ARTDADAADL ITSDCDPYDS GFITGERTSE GFYRTHAGIE QAISRGLAYA PYADLVWCET STPDLELARR FADAIHAKYP GKLLAYNCSP SFNWQKNLDD KTIASFQQQL SDMGYKYQFI TLAGIHSMWF NMFDLAHAYA QGEGMKHYVE KVQQPEFAAA KDGYTFVSHQ QEVGTGYFDK VTTIIQGGAS SVTALTGSTE EAQF
|
| |