Gene SeD_A4593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4593 
SymbolaceA 
ID6871441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4433720 
End bp4435024 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content56% 
IMG OID642787498 
Productisocitrate lyase 
Protein accessionYP_002218096 
Protein GI198243862 
COG category[C] Energy production and conversion 
COG ID[COG2224] Isocitrate lyase 
TIGRFAM ID[TIGR01346] isocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC GTACTCAACA AATCGAAGAA TTACAGAAAG AGTGGACACA ACCGCGCTGG 
GAAGGCATCA CCCGCCCGTA CAGCGCGGAG GAGGTGGTGA AATTACGCGG CTCGGTTAAC
CCGGAATGCA CGCTGGCGCA GCTCGGCGCA GCGAAAATTT GGCGGCTGTT GCACGGTGAA
GCGAAAAAAG GCTATATCAA CAGCCTTGGC GCGCTGACTG GCGGTCAGGC GTTGCAGCAG
GCGAAAGCCG GTATTGAGGC GATTTATCTT TCAGGCTGGC AGGTAGCGGC AGATGCCAAC
CTGGCATCCA GCATGTATCC GGATCAATCG TTGTACCCGG CAAACTCTGT TCCGGCGGTA
GTGGATCGGA TCAACAACAC TTTTCGTCGT GCAGATCAGA TCCAGTGGGC ATCCGGTATT
GAACCCAATG ATCCGCGCTA TGTGGATTAC TTCCTGCCGA TCGTTGCTGA TGCGGAAGCC
GGTTTTGGCG GCGTTCTGAA TGCCTTCGAA CTGATGAAAT CGATGATTGA AGCCGGTGCA
GCGGCCGTTC ACTTCGAAGA TCAGCTGGCG TCGGTGAAGA AATGCGGCCA TATGGGCGGC
AAGGTGCTGG TCCCCACGCA GGAAGCGATT CAGAAACTGG TTGCTGCGCG TCTGGCCGCT
GATGTGATGG GTGTCCCGAC GCTGGTGATT GCGCGTACCG ATGCGGATGC GGCAGATCTG
ATTACTTCCG ACTGCGATCC CTATGACAGC GGTTTTATTA CCGGCGAACG CACCAGCGAA
GGTTTCTACC GCACCCATGC GGGCATTGAG CAGGCGATCA GCCGCGGTCT GGCGTATGCC
CCGTATGCCG ATCTGGTATG GTGCGAAACT TCTACGCCGG ATCTCGAATT GGCGCGTCGT
TTTGCCGATG CTATCCACGC GAAGTATCCG GGCAAACTGC TGGCCTATAA CTGTTCGCCA
TCCTTCAACT GGCAGAAGAA TCTGGACGAC AAGACCATTG CCAGCTTCCA GCAGCAGTTG
TCGGACATGG GTTACAAATA CCAGTTTATT ACCCTGGCGG GCATCCACAG CATGTGGTTC
AACATGTTCG ACCTGGCGCA TGCATACGCG CAGGGTGAGG GTATGAAACA CTATGTTGAG
AAGGTTCAAC AACCCGAGTT CGCCGCGGCG AAAGACGGCT ACACCTTTGT TTCCCACCAG
CAGGAAGTGG GCACTGGTTA CTTCGACAAA GTCACCACCA TTATTCAGGG CGGCGCGTCA
TCCGTTACCG CGTTAACGGG TTCCACCGAA GAAGCGCAGT TTTGA
 
Protein sequence
MKTRTQQIEE LQKEWTQPRW EGITRPYSAE EVVKLRGSVN PECTLAQLGA AKIWRLLHGE 
AKKGYINSLG ALTGGQALQQ AKAGIEAIYL SGWQVAADAN LASSMYPDQS LYPANSVPAV
VDRINNTFRR ADQIQWASGI EPNDPRYVDY FLPIVADAEA GFGGVLNAFE LMKSMIEAGA
AAVHFEDQLA SVKKCGHMGG KVLVPTQEAI QKLVAARLAA DVMGVPTLVI ARTDADAADL
ITSDCDPYDS GFITGERTSE GFYRTHAGIE QAISRGLAYA PYADLVWCET STPDLELARR
FADAIHAKYP GKLLAYNCSP SFNWQKNLDD KTIASFQQQL SDMGYKYQFI TLAGIHSMWF
NMFDLAHAYA QGEGMKHYVE KVQQPEFAAA KDGYTFVSHQ QEVGTGYFDK VTTIIQGGAS
SVTALTGSTE EAQF