| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4534 |
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| Symbol | trmA |
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| ID | 6872469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 4377708 |
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| End bp | 4378808 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642787445 |
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| Product | tRNA (uracil-5-)-methyltransferase |
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| Protein accession | YP_002218056 |
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| Protein GI | 198243648 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0714454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.000000375017 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCCCG AACATCTTCC GACAGAACAG TATGAGGCGC AGCTGGCCGA AAAAGTGGCG
CGCTTGCAGA GTATGATGGC GCCGTTTTCT GGCCTGGTTC CGGAAGTATT TCGCTCGCCG
GTCAGTCACT ATCGTATGCG TGCGGAATTT CGCCTGTGGC ATGACGGCGA TGACCTGTAC
CACATTATGT TTGATCAGCA GACCAAAAGC CGGATTCGCG TTGACACCTT CCCGGCGGCC
AGCCAACTGA TTAATACCTT AATGAAGGCG ATGATTGCCG GCGTGCGCGA TAATCATGCA
CTGCGGCATA AGCTGTTCCA GATCGATTAT CTCACGACCT TGAGCAACCA GGCGGTAGTG
TCGTTGCTGT ACCATAAGAA GCTGGACGAA GAGTGGCGTG AAGCCGCCAC TGCGTTACGC
GATGCTTTAC GCGCGCAAGG TCTGAACGTA CACCTGATTG GCCGGGCCAC TAAAACTAAA
ATCGAATTGG ATCAGGATTA TATTGATGAG CGTCTGCCTG TGGCAGGTAA AGAGATGATC
TACCGCCAGG TCGAAAACAG CTTTACGCAG CCAAACGCCG CCATGAATAT TCAGATGTTA
GAGTGGGCGC TGGAGGTGAC GAAAGACTCA AAAGGCGATC TGCTTGAGTT GTATTGCGGC
AACGGCAATT TTTCTTTAGC GCTGGCGCGC AATTTTAACC GCGTGCTGGC AACCGAAATC
GCCAAACCGT CCGTCGCTGC CGCACAGTAC AATATTGCCG CTAATCATAT TGATAATGTG
CAAATTATTC GCATGGCGGC GGAAGAGTTT ACCCAGGCGA TGAATGGCGT TCGTGAGTTT
AACCGCCTGC AGGGGATCGA CCTGAAGCGC TATCAGTGCG AAACCATTTT TGTCGATCCG
CCGCGCAGCG GTCTGGACAG CGAAACGGAA AAAATGGTGC AGGCTTATCC ACGTATTCTG
TACATTTCCT GCAATCCGGA AACGTTGTGC AAAAACCTGG AAACGTTAAG CCAGACGCAC
ACGGTGTCTC GCCTGGCGCT ATTCGATCAG TTCCCGTATA CGCATCATAT GGAATGCGGG
GTATTACTCA CCGCAAGGTA A
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| Protein sequence | MTPEHLPTEQ YEAQLAEKVA RLQSMMAPFS GLVPEVFRSP VSHYRMRAEF RLWHDGDDLY
HIMFDQQTKS RIRVDTFPAA SQLINTLMKA MIAGVRDNHA LRHKLFQIDY LTTLSNQAVV
SLLYHKKLDE EWREAATALR DALRAQGLNV HLIGRATKTK IELDQDYIDE RLPVAGKEMI
YRQVENSFTQ PNAAMNIQML EWALEVTKDS KGDLLELYCG NGNFSLALAR NFNRVLATEI
AKPSVAAAQY NIAANHIDNV QIIRMAAEEF TQAMNGVREF NRLQGIDLKR YQCETIFVDP
PRSGLDSETE KMVQAYPRIL YISCNPETLC KNLETLSQTH TVSRLALFDQ FPYTHHMECG
VLLTAR
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