Gene SeD_A4530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4530 
SymboloxyR 
ID6875804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp4374152 
End bp4375069 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content56% 
IMG OID642787442 
ProductDNA-binding transcriptional regulator OxyR 
Protein accessionYP_002218053 
Protein GI198246077 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.236033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.00000332798 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATATTC GTGATCTTGA ATATCTGGTG GCGTTAGCCG AACATCGCCA TTTCCGGCGA 
GCGGCGGACT CCTGTCACGT CAGCCAGCCA ACCCTTAGTG GGCAAATACG TAAGCTGGAA 
GATGAGCTGG GCGTTATGCT GCTGGAGCGT ACGAGCCGTA AAGTGCTGTT TACCCAGGCG 
GGCTTACTGC TGGTGGATCA GGCGCGTACC GTACTGCGTG AGGTCAAGGT GCTCAAGGAG 
ATGGCAAGCC AACAAGGCGA GACGATGTCC GGCCCGCTGC ATATTGGTTT AATCCCAACA 
ATTGGTCCCT ATTTGCTGCC GCTTATCATT CCAATGTTGC ACCAGACTTT CCCGAAGCTG 
GAAATGTATC TGCATGAGGC GCAAACGCAT CAGCTGTTAG CGCAACTCGA TAGCGGCAAG 
CTTGACTGCG CTATTCTGGC GCTGGTGAAA GAGAGCGAGG CGTTTATCGA AGTGCCGCTG 
TTTGATGAGC CCATGATGCT GGCTATTTAT GAGGATCATC CGTGGGCGAA TCGCGATCGC 
GTGCCGATGT CCGATCTGGC GGGCGAGAAA TTGCTGATGC TGGAAGATGG CCACTGTCTG 
CGCGATCAGG CGATGGGGTT CTGTTTTGAA GCGGGAGCGG ATGAAGATAC CCATTTCCGG 
GCGACCAGTC TGGAAACGCT GCGCAACATG GTGGCGGCGG GCAGTGGTAT TACACTACTC 
CCCGCGCTGG CCGTACCGCA GGAGCGTAAG CGCGACGGCG TGGTTTATCT GCCATGCATT 
AAGCCGGAGC CGCGTCGTAC CGTGGGGCTG GTTTATCGCC CGGGATCGCC GCTGCGTAGC 
CGTTATGAGC AACTGGCAGA GGCCATCCGT GGCGCAATGG ATGGCCATTT CGACAAGGCG 
TTAAAACAGG CGGTTTAA
 
Protein sequence
MNIRDLEYLV ALAEHRHFRR AADSCHVSQP TLSGQIRKLE DELGVMLLER TSRKVLFTQA 
GLLLVDQART VLREVKVLKE MASQQGETMS GPLHIGLIPT IGPYLLPLII PMLHQTFPKL 
EMYLHEAQTH QLLAQLDSGK LDCAILALVK ESEAFIEVPL FDEPMMLAIY EDHPWANRDR 
VPMSDLAGEK LLMLEDGHCL RDQAMGFCFE AGADEDTHFR ATSLETLRNM VAAGSGITLL 
PALAVPQERK RDGVVYLPCI KPEPRRTVGL VYRPGSPLRS RYEQLAEAIR GAMDGHFDKA 
LKQAV