Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4519 |
Symbol | pflD |
ID | 6873827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4359887 |
End bp | 4362184 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642787432 |
Product | putative formate acetyltransferase 2 |
Protein accession | YP_002218043 |
Protein GI | 198242547 |
COG category | [C] Energy production and conversion |
COG ID | [COG1882] Pyruvate-formate lyase |
TIGRFAM ID | [TIGR01774] pyruvate formate-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.000438514 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCCATC GTATTCAACG CCTCAAAGCC GCTCTGTTTC AGAATCACCG TGAAATTTCT CTGGAGCGCG CGCTGCTTTA TACCGCCAGC CATCAGCAGA CGGAGGGCGA ACCGGTCATT TTGCGCCGCG CCAAAGCGAC GGCGTATATC CTTGAACATG TTGAAATTTC GATTCGTGAC GAGGAGCTGA TTGCCGGAAA CCGAACCGTT AAGCCGCGCG CGGGTATTAT GTCGCCGGAA ATGGACCCGT ATTGGCTGCT TAACGAGCTG GATCGGTTCC CGACGCGTCC GCAGGACCGT TTTGATATCA GCGAAGAGGA TAAGCGCCTC TATCGTGAGG TTCTATTCCC GTACTGGGAA AAACGGTCGA TGAAAGATTT TATTAACGGG CAGATGACCG ATGAGGTGAA AGCCGCCGTC AGCACCCAGA TTTTTAGCAT TAACCAGACG GATAAAGGGC AGGGGCATAT CATTATTGAT TATCCACGCT TGCTCAATAA CGGGCTGGGT GAACTGGCGG CGCAGATGCG CGCGCGCTGC GAGCAACAGC CGGAAAACGA CTTTTATCAG GCCGCTCTGT TGTTACTTGA GGCATCGCAA CGCCACATCC TGCGTTATGC CGTACTGGCG GAACACCAGG CGGAGCGCTG CCCGGACGCT CGTCGTCGTC AGGAACTGCT CACCATTGCC GCCAATTCGC GGCATAACGC GCAGCACAAA CCACAGACGT TCTGGCAAGC ATGTCAGCTG TTCTGGTACA TGAACATTAT TTTGCAGTAC GAGTCCAACG CCAGTTCGCT GTCGCTCGGG CGCTTCGACC AGTACATGCT GCCGTTTTAT CAGACTTCGC TCACTCAGGG CGACGATCCG GCGTTCCTGA AAGAGTTGCT CGAGTCGCTG TGGGTGAAAT GCAACGATAT CGTGCTGCTG CGCTCCACCA GTAGCGCGCG CTATTTTGCC GGTTTCCCGA CGGGTTACAC CGCGCTGCTG GGCGGATTGA CGGAAAGCGG ACGCAGCGCG GTAAACGTGC TCTCTTTTCT CTGCCTGGAT GCCTACCAGA GCGTGCAGTT GCCGCAGCCG AATCTCGGCG TGCGCACTAA CGCGCTGATT GATACGCCGT TCCTGCTCAA GACCGCCGAG ACCATTCGCC TCGGTACCGG CATTCCACAG ATTTTCAATG ACGAAGTGGT GGTTCCCGCG TTCCTTAACC GTGGCGTGTC GTTGGAGGAT GCGCGCGATT ATGCGGTGGT GGGATGTGTT GAGCTGTCGA TTCCGGGCAG AACCTACGGG CTGCATGACA TCGCCATGTT TAATCTGCTG AAAGTGATGG AAATCAGCTT GTATGAAAAT GAGGGCAACG ACACTCTTAC TTATGAGGCG TTGCTGGCGC ATATTCGCGC CAAAATCAGT CACTACATTA CACTAATGGT AGAAGGCAGC AATATTTGCG ATATCGGCCA TCGTGACTGG GCGCCGGTGC CGCTGCTCTC TTCGTTTATC AGCGACTGCC TGGAGAAAGG GCGAGACATC ACCGACGGCG GCGCGCGCTA TAACTTTTCG GGCGTACAGG GCATCGGTAT CGCCAACCTG AGTGATTCCC TTCATGCGCT CAATGGGCTG GTATTCGATC AGCAGCGCCT GAGTTTTGAT GCGCTGCTGT CGATCCTGAA AAACAACTTC GCCACGCCAG AAGGGGAAAA GATCCGCGCC AGGCTTATCA ACCGCTTCGA AAAATATGGC AACGACATTG ATAATGTCGA TAACATCAGC GCCGAACTGC TGCGGTATTA CTGCAAAGAG GTGGAAAAAT ACCAGAATCC GCGCGGCGGC CAGTTTACGC CGGGTTCATA CACGGTTTCC GCGCATGTGC CGCTGGGAGC GGTGGTCGGC GCGACACCGG ACGGGCGTTT TGCCGGAGAA CAGCTGGCGG ATGGCGGCCT GTCGCCGATG CTCGGACAGG ATATGCAAGG GCCGACGGCG GTACTAAAAT CAGTAAGTAA GTTGGATAAC ACGCTGCTGT CGAACGGTAC GTTGCTGAAC GTGAAGTTTA CTCCTGCGAC TCTGGAAGGA GAGGCGGGAC TGCGCAAGCT GGCGGATTTC CTGCGCGCGT TTACCCAGCT CAAACTGCAG CACATCCAGT TTAATGTGGT GAATGCCGAC ACATTGCGCG AAGCGCAGCT ACGGCCTCAG GATTTCGCTG GGCTGGTGGT GCGCGTGGCG GGCTACAGCG CCTTCTTTGT CGAGCTGTCG AAGGAGATTC AGGATGACAT TATTCGCCGC ACCGCGCATC AGTTGTGA
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Protein sequence | MTHRIQRLKA ALFQNHREIS LERALLYTAS HQQTEGEPVI LRRAKATAYI LEHVEISIRD EELIAGNRTV KPRAGIMSPE MDPYWLLNEL DRFPTRPQDR FDISEEDKRL YREVLFPYWE KRSMKDFING QMTDEVKAAV STQIFSINQT DKGQGHIIID YPRLLNNGLG ELAAQMRARC EQQPENDFYQ AALLLLEASQ RHILRYAVLA EHQAERCPDA RRRQELLTIA ANSRHNAQHK PQTFWQACQL FWYMNIILQY ESNASSLSLG RFDQYMLPFY QTSLTQGDDP AFLKELLESL WVKCNDIVLL RSTSSARYFA GFPTGYTALL GGLTESGRSA VNVLSFLCLD AYQSVQLPQP NLGVRTNALI DTPFLLKTAE TIRLGTGIPQ IFNDEVVVPA FLNRGVSLED ARDYAVVGCV ELSIPGRTYG LHDIAMFNLL KVMEISLYEN EGNDTLTYEA LLAHIRAKIS HYITLMVEGS NICDIGHRDW APVPLLSSFI SDCLEKGRDI TDGGARYNFS GVQGIGIANL SDSLHALNGL VFDQQRLSFD ALLSILKNNF ATPEGEKIRA RLINRFEKYG NDIDNVDNIS AELLRYYCKE VEKYQNPRGG QFTPGSYTVS AHVPLGAVVG ATPDGRFAGE QLADGGLSPM LGQDMQGPTA VLKSVSKLDN TLLSNGTLLN VKFTPATLEG EAGLRKLADF LRAFTQLKLQ HIQFNVVNAD TLREAQLRPQ DFAGLVVRVA GYSAFFVELS KEIQDDIIRR TAHQL
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