Gene SeD_A4511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4511 
SymbolmetF 
ID6873053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4349601 
End bp4350491 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content52% 
IMG OID642787424 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_002218035 
Protein GI198241770 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID[TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.916562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.23325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTT TTCACGCCAA CCAGCGGGAA GCCCTGAATC AGAGCCTGGC GGAAGTACAG 
GGTCAGATTA ACGTTTCGTT TGAATTTTTC CCGCCGCGCA CCAGTGAAAT GGAGCAAACC
CTGTGGAACT CCATCGATCG CCTGAGCAGT CTGAAACCGA AGTTTGTTTC GGTAACGTAT
GGCGCCAACT CCGGGGAGCG CGACCGCACT CATAGCGTTA TTAAAGGCAT TAAAGAGCGT
ACTGGGCTTG AGGCCGCGCC GCACCTTACC TGTATTGACG CCACCCGCGA TGAACTGCGC
ACCATCGCCC GCGACTACTG GAATAACGGT ATCCGCCACA TTGTCGCTTT GCGCGGCGAT
TTGCCGCCGG ACAGCGGTAA GCCGGAGATG TACGCCGCCG ATCTGGTTGG TTTGCTCAAA
GAGGTGGCCG ATTTCGATAT TTCAGTAGCA GCCTATCCGG AGGTACATCC GGAAGCGAAA
AGCGCGCAGG CCGATCTGCT TAATCTGAAG CGTAAAGTGG ATGCTGGCGC TAACCGCGCG
ATAACCCAAT TTTTCTTCGA TGTGGAAAGC TACCTGCGTT TTCGCGACCG CTGTGTTTCT
GCCGGTATCG ACGTAGAGAT TATTCCCGGC ATTTTACCGG TGTCTAACTT TAAACAGGCG
AAAAAATTTG CCGATATGAC CAATGTCCGC ATTCCGTCCT GGATGTCACT GATGTTTGAG
GGGCTGGATA ATGACGCAGA AACCCGCAAG CTGGTGGGCG CTAACATTGC GATGGACATG
GTGAAAATTT TAAGCCGTGA AGGAGTGAAG GATTTCCACT TCTACACGTT GAATCGTGCG
GAAATGAGTT ATGCCATTTG CCACACACTG GGCGTAAGAC CGGGTTTATA A
 
Protein sequence
MSFFHANQRE ALNQSLAEVQ GQINVSFEFF PPRTSEMEQT LWNSIDRLSS LKPKFVSVTY 
GANSGERDRT HSVIKGIKER TGLEAAPHLT CIDATRDELR TIARDYWNNG IRHIVALRGD
LPPDSGKPEM YAADLVGLLK EVADFDISVA AYPEVHPEAK SAQADLLNLK RKVDAGANRA
ITQFFFDVES YLRFRDRCVS AGIDVEIIPG ILPVSNFKQA KKFADMTNVR IPSWMSLMFE
GLDNDAETRK LVGANIAMDM VKILSREGVK DFHFYTLNRA EMSYAICHTL GVRPGL