Gene SeD_A4502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4502 
SymbolmetL 
ID6872576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4337833 
End bp4340265 
Gene Length2433 bp 
Protein Length810 aa 
Translation table11 
GC content59% 
IMG OID642787417 
Productbifunctional aspartate kinase II/homoserine dehydrogenase II 
Protein accessionYP_002218028 
Protein GI198243768 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGA TTGCGCAGGC AGGGGCGAAA GGTCGTCAAC TGCATAAATT TGGCGGCAGT 
AGTCTGGCGG ATGTGAAGTG TTACCTGCGT GTCGCAGGCA TTATGGCGGA GTATTCGCAG
CCTGACGATA TGATGGTAGT GTCCGCCGCA GGCAGTACCA CCAACCAGTT GATTAGCTGG
CTCAAGTTAA GCCAGACCGA TCGCCTTTCT GCGCATCAGG TATTACAGAC GTTACGCCGC
TACCAGTGCG ATCTGATTAG CGGGCTGCTT CCCGCCGACG CGGCAGATGA CTTAACCAGC
GCTTTTATCA GCGATCTGGA ACGTCTTGCC GCCTTGCTCG ACGGCGGCGT AACGGATGCC
GTCTATGCTG AGATTGTCGG ACACGGCGAA ATTTGGTCGG CGAGATTGAT GTCCGCCGTC
CTGAATCAGC AGGGGCTGGA TGCCGCCTGG CTGGACGCGC GCGCATTTTT ACGCGCCGAA
CGCGCCGCAC AGCCGCAGGT TGATGAAGGG CTATCTTATC CTTTATTGCA ACAGCTACTG
GCGCAGCATC CGGGCAAACG TCTGGTCGTG ACCGGCTTTA TCAGCCGCAA TCATGACGGC
GAAACGGTCC TGTTAGGCCG GAACGGTTCC GACTATTCCG CCACGCAAAT CGGCGCGCTG
GCGGGCGTTT CCCGCGTGAC CATCTGGAGC GATGTCGCGG GCGTTTATAG TGCCGACCCG
CGCAAAGTGA AAGATGCCTG CCTGCTGCCG TTGCTGCGTC TGGACGAAGC CAGCGAGCTG
GCGCGTCTGG CGGCGCCTGT TCTGCACGCC CGTACGCTAC AGCCAGTGTC CGGCAGCGAT
ATCGATTTGC AGTTGCGCTG TAGCTACACG CCGGATCAAG GGTCAACCCG AATTGAACGA
GTGCTGGCTT CCGGGACGGG CGCGCGTATC GTGACCAGTC ACGATGATAT CTGTCTGATT
GAGTTTCAGG TGCCCGCCAG CCAGGATTTC AGGCTGGCGC ATAAAGAGCT CGACCAAATT
TTAAAACGGG CGCAGGCGCG TCCGCTGGCA GTGGGCGTGC ATCGCGATCG CCAGCTATTG
CAGTTCTGCT ATACCGCCGA GGTAGCGGAT AGCGTACTGA AACTCCTCGA CGATGTCGGG
CTGCCGGGCG AATTGCGCCT GCGGCAGGGG CTGGCGCTGG TGGCGATGGT CGGTGCGGGC
GTTACTCGCA ATCCGCTACA CTGCCATCGC TTCTGGCAGC AGCTTAAAGG TCAGCCAGTG
GAATTTACCT GGCAGTCGGA GGAGGGCATC AGTCTGGTGG CGGTGCTGCG TACCGGCCCA
ACTGAGAGCC TGATTCAGGG GCTGCATCAG TCGGTTTTCC GCGCCGAAAA ACGCATTGGC
CTGATGCTGT TCGGTAAGGG GAACATCGGC TCCCGTTGGC TGGAACTGTT TGCCCGTGAA
CAAAGCACGC TTTCCGCGCG TACTGGCTTT GAATTTGTGC TGGCGGGCGT GGTGGATAGC
CGCCGTAGCC TGCTGAATTA TGAAGGGCTG GATGCCAGCC GCGCGCTGGC ATTCTTTGAT
GATGAAGCCG TTGAGCAGGA CGAAGAGTCG CTATTCCTGT GGATGCGTGC GCATCCGTAT
GATGATTTAG TGGTGCTGGA TGTGACAGCA AGCGAGCAAC TGGCCGATCA GTATCTTGAT
TTCGCCAGCC ACGGTTTTCA TGTGATTAGC GCCAATAAAC TGGCGGGCGC AAGCGCCAGC
GATAAGTATC GCCAGATTCA TGACGCGTTT GAAAAAACCG GGCGTTACTG GCTGTATAAC
GCCACCGTGG GCGCGGGATT GCCGATCAAC CACACGGTGC GGGATCTGAT TGACAGCGGC
GATACGATTC TCTCGATCAG CGGGATCTTC TCCGGGACGC TATCCTGGCT GTTCCTGCAA
TTTGACGGCA CGGTGCCGTT TACCGATCTG GTGGATCAGG CCTGGCAGCA GGGGCTGACC
GAACCCGATC CGCGCGTCGA TCTTTCCGGA AAAGATGTCA TGCGTAAGCT GGTGATTCTG
GCGCGCGAGG CGGGATACGA CATCGAGCCG GATCAGGTGC GTGTAGAATC GTTGGTGCCG
GCGCACTGTG AAGAAGGGTC TATCGATCAC TTTTTCGAAA ACGGCGACGC GCTGAATGAA
CAGATGGTGC AGCGTCTGGA GGCAGCCCGC GAACTGGGGC TGGTGTTGCG TTACGTGGCG
CGTTTCGACG CCAATGGCAA AGCGCGCGTC GGCGTTGAAG CGGTGCGTCC GGAACATCCG
CTGGCGGCGC TGCTGCCGTG CGATAATGTC TTTGCTATTG AAAGCCGCTG GTATCGCGAT
AACCCGCTGG TGATCCGTGG GCCGGGCGCG GGCCGCGATG TGACCGCCGG GGCGATTCAG
TCGGATATCA ACCGCCTGGC GCAGTTGCTG TAA
 
Protein sequence
MSVIAQAGAK GRQLHKFGGS SLADVKCYLR VAGIMAEYSQ PDDMMVVSAA GSTTNQLISW 
LKLSQTDRLS AHQVLQTLRR YQCDLISGLL PADAADDLTS AFISDLERLA ALLDGGVTDA
VYAEIVGHGE IWSARLMSAV LNQQGLDAAW LDARAFLRAE RAAQPQVDEG LSYPLLQQLL
AQHPGKRLVV TGFISRNHDG ETVLLGRNGS DYSATQIGAL AGVSRVTIWS DVAGVYSADP
RKVKDACLLP LLRLDEASEL ARLAAPVLHA RTLQPVSGSD IDLQLRCSYT PDQGSTRIER
VLASGTGARI VTSHDDICLI EFQVPASQDF RLAHKELDQI LKRAQARPLA VGVHRDRQLL
QFCYTAEVAD SVLKLLDDVG LPGELRLRQG LALVAMVGAG VTRNPLHCHR FWQQLKGQPV
EFTWQSEEGI SLVAVLRTGP TESLIQGLHQ SVFRAEKRIG LMLFGKGNIG SRWLELFARE
QSTLSARTGF EFVLAGVVDS RRSLLNYEGL DASRALAFFD DEAVEQDEES LFLWMRAHPY
DDLVVLDVTA SEQLADQYLD FASHGFHVIS ANKLAGASAS DKYRQIHDAF EKTGRYWLYN
ATVGAGLPIN HTVRDLIDSG DTILSISGIF SGTLSWLFLQ FDGTVPFTDL VDQAWQQGLT
EPDPRVDLSG KDVMRKLVIL AREAGYDIEP DQVRVESLVP AHCEEGSIDH FFENGDALNE
QMVQRLEAAR ELGLVLRYVA RFDANGKARV GVEAVRPEHP LAALLPCDNV FAIESRWYRD
NPLVIRGPGA GRDVTAGAIQ SDINRLAQLL