Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4501 |
Symbol | metB |
ID | 6874128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4336670 |
End bp | 4337830 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642787416 |
Product | cystathionine gamma-synthase |
Protein accession | YP_002218027 |
Protein GI | 198243263 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR02080] O-succinylhomoserine (thiol)-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0840458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGTA AACAGGCCAC TATCGCAGTG CGTAGCGGAT TAAACGATGA CGAACAATAC GGCTGCGTTG TGCCGCCAAT CCATCTCTCC AGTACCTATA ACTTTACCGG TTTCAATGAG CCGCGCGCGC ATGATTATTC CCGCCGCGGT AATCCCACGC GTGATGTTGT TCAGCGCGCA TTAGCGGAAC TGGAAGGCGG CGCGGGCGCG GTATTGACGA ATACCGGCAT GTCGGCGATT CATCTGGTCA CCACCGTTTT CCTCAAGCCG GGCGATCTGC TGGTCGCGCC GCATGATTGC TATGGCGGCA GTTATCGTCT GTTTGACAGT CTGGCGACAC GCGGCTGTTA TCGTGTGCGG TTTGTCGATC AGGGCGATGA ACGCGCCTTA CAGGCGGCGC TGGAAGAAAA ACCGAAGCTG GTACTGGTAG AAAGTCCAAG TAATCCATTG TTACGCGTGG TGGATATTGC GAAAATCTGT CGGCTGGCGC GCGAGGCGGG CGCAGTGAGC GTCGTTGATA ACACGTTTTT AAGCCCGGCG CTGCAAAATC CGCTGGCGTT GGGTGCCGAT CTGGTGTTGC ATTCATGCAC GAAATATCTC AACGGTCATT CGGATGTCGT GGCCGGCGTG GTGATTGCGA AAGATCCGGA AGTGGTCACT GAACTGGCGT GGTGGGCGAA TAATATTGGC GTGACCGGCG GGGCGTTTGA TAGCTATCTG CTGCTGCGCG GTTTGCGAAC TCTGGTGCCG CGTATGGAGC TGGCGCAGCG CAACGCGCAG GCGATTGTGA AATATCTGCA AACCCAGCCG TTGGTGAAAA AGCTGTATCA CCCGTCGCTG CCGGAAAATC AGGGGCATGA AATTGCCGCG CGCCAGCAAA AAGGCTTTGG CGCAATGTTG AGTTTTGAAC TGGATGGGGA TGAGGAGACG CTGCGTCGTT TTCTGGGCGG GCTGTCGCTG TTTACGCTGG CGGAATCTTT AGGGGGAGTG GAAAGTTTGA TCTCTCACGC CGCCACCATG ACGCATGCCG GTATGTCGCC GCAGGCGCGT GCCGCCGCCG GGATCTCCGA AACGCTACTG CGTATCTCCA CCGGTATTGA AGATGGCGAA GATTTAATTG CCGACCTGGA AAATGGCTTC CGGGCTGCAA ACAAGGGGTA A
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Protein sequence | MTRKQATIAV RSGLNDDEQY GCVVPPIHLS STYNFTGFNE PRAHDYSRRG NPTRDVVQRA LAELEGGAGA VLTNTGMSAI HLVTTVFLKP GDLLVAPHDC YGGSYRLFDS LATRGCYRVR FVDQGDERAL QAALEEKPKL VLVESPSNPL LRVVDIAKIC RLAREAGAVS VVDNTFLSPA LQNPLALGAD LVLHSCTKYL NGHSDVVAGV VIAKDPEVVT ELAWWANNIG VTGGAFDSYL LLRGLRTLVP RMELAQRNAQ AIVKYLQTQP LVKKLYHPSL PENQGHEIAA RQQKGFGAML SFELDGDEET LRRFLGGLSL FTLAESLGGV ESLISHAATM THAGMSPQAR AAAGISETLL RISTGIEDGE DLIADLENGF RAANKG
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