Gene SeD_A4494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4494 
SymbolcytR 
ID6874732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4329139 
End bp4330164 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content53% 
IMG OID642787409 
ProductDNA-binding transcriptional regulator CytR 
Protein accessionYP_002218020 
Protein GI198245488 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATCGA ACAAGCAGGT TACTGCCGCT ACGATGAAGG ATGTTGCGTT GAAGGCGAAA 
GTCTCTACGG CAACCGTATC CCGCGCGTTA ATGAACCCCG ATAAAGTCTC CCAGTCGACC 
CGTAGCCGGG TTGAACAGGC CGCGCTTGAA GTGGGTTATT TCCCGCAGTC GATGGGGCGA 
AATGTAAAAC GCAATGAATC CCGTACGATT TTGGTGATTG TCCCGGATAT TTGCGATCCC 
TTCTTCAGTG AAATTATCCG CGGTATCGAA GTGACCGCGG CAGAACAGGG GTATCTGGTG 
CTGATTGGCG ATTGCGCCCA TCAAAACCAG AAAGAAAAAA CCTTTCTTAA TCTCATCATC 
ACCAAACAGA TCGACGGCAT GGTACTTCTC AGTTCCCGAC TGCCCTTTGA CGCCAGCGTT 
GAGGAGCAGC GCAATTTGCC TCCGATGGTG ATGTCGAATG AGTTCGCGCC GGAGCTTGAA 
TTGCCGACGG TACATATCGA TAACCTGACC GCCGCGTTCA ACGCCATGAA TTACCTGTTA 
GATTTGGGCC ACAAGCGGAT TGGTTGTATT GCGGGGCCGG AAGATATGCC GCTCTGTCAC 
TATCGCTTAC AAGGTTACGT ACAGGCATTA AGACGCAGTG GCATTGTGGT CGATCCGCAT 
TACATCGCCC GTGGCGACTT TACCTTTGAA GCCGGGGCAA ACGCATTAAA GCAGTTGCTT 
GAGCAACCGT TGCCGCCTAC CGCCGTCTTT TGTCATAGCG ACGTAATGGC GCTGGGCGCC 
CTCTCCTGGG CCAAGCGCCA GGGTCTGAAA GTACCTGACG ATCTGTCGAT TATCGGCTTT 
GACAATATCG CGCTGGCCGA GTTTTGCGAC CCTCCGTTGA CAACCGTGGC GCAGCCGCGT 
TTTGACATTG GTCGCGAAGC GATGCTGCTG TTGCTCGATC AGATGCAGGG GCAAAATGTG 
AGCAGCGGCT CGCGTTTAAT GGATTGCGAG CTGATTATTC GCGGTTCTAC GCGCGCTTTA 
CCCTAA
 
Protein sequence
MKSNKQVTAA TMKDVALKAK VSTATVSRAL MNPDKVSQST RSRVEQAALE VGYFPQSMGR 
NVKRNESRTI LVIVPDICDP FFSEIIRGIE VTAAEQGYLV LIGDCAHQNQ KEKTFLNLII 
TKQIDGMVLL SSRLPFDASV EEQRNLPPMV MSNEFAPELE LPTVHIDNLT AAFNAMNYLL 
DLGHKRIGCI AGPEDMPLCH YRLQGYVQAL RRSGIVVDPH YIARGDFTFE AGANALKQLL 
EQPLPPTAVF CHSDVMALGA LSWAKRQGLK VPDDLSIIGF DNIALAEFCD PPLTTVAQPR 
FDIGREAMLL LLDQMQGQNV SSGSRLMDCE LIIRGSTRAL P