Gene SeD_A4478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4478 
Symbol 
ID6871292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp4316029 
End bp4316358 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content42% 
IMG OID642787393 
Productautoinducer-2 (AI-2) modifying protein LsrG 
Protein accessionYP_002218004 
Protein GI198242713 
COG category[S] Function unknown 
COG ID[COG1359] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.519027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones94 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTA TTTTATTTGG AATAATCAGG GGGGTAATGA TGCATGTTAC GCTGGTTGAA 
ATTAACGTTC ATGATGACAA GGTTGAACAA TTTATCGATG TTTTTCGGCA GAATCATCTG 
GGCTCAATTA AAGAGCCGGG TAACTTGCGT TTTGATGTTC TGCAGGATCC GCAGGTGCCT 
ACGCGATTTT ATATTTATGA AGCCTACGTT GATGAACAGG CCGTCGCTTT TCACAAGACA 
ACGCCACACT ATAAAACTTG CGTGGAGCAG CTTGAACCGT TGATGACCGG TCCGCGGACA 
AAAAAAGTTT TTATGGGTTT GATGCCTTAA
 
Protein sequence
MTVILFGIIR GVMMHVTLVE INVHDDKVEQ FIDVFRQNHL GSIKEPGNLR FDVLQDPQVP 
TRFYIYEAYV DEQAVAFHKT TPHYKTCVEQ LEPLMTGPRT KKVFMGLMP