Gene SeD_A4471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4471 
Symbol 
ID6874094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4309244 
End bp4310203 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content50% 
IMG OID642787386 
Producthypothetical protein 
Protein accessionYP_002217997 
Protein GI198243373 
COG category[K] Transcription 
COG ID[COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA ATACGTTGGT ATCTGATTAT GGAATGTGCG AAGAAGAGCA GGTGGCGCGT 
ATTGCCTGGT TCTACTATCA CGATGGATTG ACGCAGAGTG AAATCAGCGA GCGTCTGGGG
CTAACCCGGC TAAAGGTTTC TCGTCTGCTG GAGAAAGGGC ATCAGTCCGG TATTATTCGC
GTACAAATCA ACTCCCGCTT TGAAGGGTGT CTTGAGTATG AAAATGCCTT GCGCAACCAC
TTCGCATTGC AGAATATCCG CGTGCTGCCG GCATTACCCG ATGCCGATAT TGGTCTGCGC
TTAGGAATCG GCGCCGCCCA TATGTTGATG GAGTCTCTGC GGCCACAGCA ACTGCTGGCC
GTCGGCTTTG GCGAAGCCAC GATGACCACA TTAAAACGCC TCAGCGGATT TATCTCGGCG
CAACAAATCC GACTGGTCAC GTTATCCGGC GGCGTGGGGC CGTATATGAC CGGAATAGGC
CAGCTTGATG CCGCTTGTAG CGTAAGTATT ATGCCCGCGC CGCTGCGCGC ATCATCGCAG
GAAATTGCCT GCACGCTGCG CAATGAAAAT AGCGTGCGGG ATGTGATGCT CACAGCGCAA
GCTGCCGATG CCGCCATCGT GGGGATTGGG GCAATTAACC AGAAAGATCA AGCCAGTATC
TTAAAATCCG GTTATATCAC TCAGGGTGAA CAACTCATGA TTGGCCGCAA AGGCGCAGTA
GGCGATATTC TGGGCTATTT TTTTGATGCT CATGGCGAAA TTATTCCAGA CATCAAAATC
CATAACGAAT TAATTGGCCT GAAGTTAAAT TCACTTTCCA CGATCCCAAC CGTGATTGGC
GTCGCCGGCG GCGAACAAAA AGCAGAAGCT ATTATTGCCG CTATGCGCGG TAACTATATC
AATGCGCTGG TTACCGATCA GAAAACCGCA GGGAAAATAA TTCAACTTAT TGAAAAATAA
 
Protein sequence
MSDNTLVSDY GMCEEEQVAR IAWFYYHDGL TQSEISERLG LTRLKVSRLL EKGHQSGIIR 
VQINSRFEGC LEYENALRNH FALQNIRVLP ALPDADIGLR LGIGAAHMLM ESLRPQQLLA
VGFGEATMTT LKRLSGFISA QQIRLVTLSG GVGPYMTGIG QLDAACSVSI MPAPLRASSQ
EIACTLRNEN SVRDVMLTAQ AADAAIVGIG AINQKDQASI LKSGYITQGE QLMIGRKGAV
GDILGYFFDA HGEIIPDIKI HNELIGLKLN SLSTIPTVIG VAGGEQKAEA IIAAMRGNYI
NALVTDQKTA GKIIQLIEK