Gene SeD_A4466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4466 
Symbol 
ID6871516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp4305974 
End bp4306696 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content51% 
IMG OID642787383 
ProductGntR family regulatory protein 
Protein accessionYP_002217994 
Protein GI198243797 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.280387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGGTTG ATAAAACGAG CTTTACTCCG CTTTATAAGC AACTATTTTT TATCATCTGT 
CAGCAGATCC AAAATGGATC CCTGCCTTTA GGCAGCCAGC TGCCGACGCA AAAAGAGATT 
GCCAGAGCCT ACAACGTCTC GCTGATTGTG GTTAAACAGG CCTGGAGCGA ATTAATCAAT 
GCGGGTATTA TTTCCTCCCA GCGCGGGAGT GGTTCGGTGG TGTGCTCGGT ACCGGAAGGC 
GTGAGCTACG GGCACACGTT TCGCGGTATT ACCCGCGATC TCCAGGACGC CAGCGTGGCG 
ATTGAGAACC GTATTCTGGA AATCGCGCCG CGCCGCGCGC GCGACGCTCA GGCAGACGGC 
TTGAGCCTGC CCGCACAGCA TCACTATCTC TATATTTCGC GTATTCGTTG CCTGAATAAC 
CGTCCGTTTA ACCATGAAAA GATCTATCTC GATCTTAGCT TCTTTCCCGA TCTGCAACTT 
ACACCGCAGG CGCTGGAGCA TACGTCGCTT TATTCGTTAT TAAACGTCAC AAGCGACTCG 
GCGATAGAAA AAGTTGAGGC GATTTTACCT TCCGCTGACC TGTGCGAAAA ATTGCAAATC 
GCCGCCAATA AACCGCTGTT ATCCGTCGCC AGACAGACGT TTCAGGCCGG GAAGGACAGC 
CCTTTTGAGT ATTGCCGCTA TTACGTGCTG TCTGAATACT TTGGTGAAAT TCATTATCAC 
TGA
 
Protein sequence
MQVDKTSFTP LYKQLFFIIC QQIQNGSLPL GSQLPTQKEI ARAYNVSLIV VKQAWSELIN 
AGIISSQRGS GSVVCSVPEG VSYGHTFRGI TRDLQDASVA IENRILEIAP RRARDAQADG 
LSLPAQHHYL YISRIRCLNN RPFNHEKIYL DLSFFPDLQL TPQALEHTSL YSLLNVTSDS 
AIEKVEAILP SADLCEKLQI AANKPLLSVA RQTFQAGKDS PFEYCRYYVL SEYFGEIHYH