Gene SeD_A4458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4458 
SymbolcpxP 
ID6874511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4297547 
End bp4298047 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content51% 
IMG OID642787376 
Productperiplasmic repressor CpxP 
Protein accessionYP_002217987 
Protein GI198243172 
COG category[N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAG TTACCGCTGC TGTTATGGCC TCAACGCTGG CATTCAGTTT TTTAAGCCAC 
GCAGCTGAAG TTGTTACAAG CGATAACTGG CACCCCGGTG ACGGGGCCAC GCAGCGTAGC
GCGCAAAATC ATATGTTTGA CGGCATAAGT TTAACCGAAC ATCAGCGTCA GCAGATGCGA
GATCTTATGC AACAGGCAAG GCACGAACAG CCTCCTGTTA ATGTTAGCGA AATGGAGACA
ATGCATCGGC TTGTCACCGC AGAAAAATTT GATGAAAGCG CTGTGCGCGC TCAGGCAGAA
AAAATGGCGC AAGAGCAGGT TGCCCGCCAG GTCGAAATGG CCCGCGTGCG TAACCAGATG
TATCGCCTGT TAACGCCGGA GCAGCAAGCG GTTTTGAATG AAAAGCATCA GCAACGAATG
GAGCAACTGC GCGACGTGGC GCAATGGCAA AAAAGTTCAT CGTTGAAATT ATTGAGTAGT
AGCAACTCAC GTTCCCAGTA A
 
Protein sequence
MRKVTAAVMA STLAFSFLSH AAEVVTSDNW HPGDGATQRS AQNHMFDGIS LTEHQRQQMR 
DLMQQARHEQ PPVNVSEMET MHRLVTAEKF DESAVRAQAE KMAQEQVARQ VEMARVRNQM
YRLLTPEQQA VLNEKHQQRM EQLRDVAQWQ KSSSLKLLSS SNSRSQ