Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4452 |
Symbol | |
ID | 6874762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 4292179 |
End bp | 4293162 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642787370 |
Product | trap dicarboxylate transporter DctP subunit |
Protein accession | YP_002217981 |
Protein GI | 198242574 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAC CTGGTTTTAT ACGTCTGGCT ACGTTGGCCT TACTCTCCAC ACTCTCTTTC TTCTCCCACG GCGAAACCAT TTTGCGCCTG GCCTACGCTG AAAATAGCCA GCCGGTAAAA GATGCGTTGC ACTTCCTGGG GCAGCAAGTT GAAGAGAAAA CGGGCGGCGA TATCAAAGTA CAGTACTTCC CGGACGGACA GCTTGGCGGC GAGCGCGAAC TGGTGGAGTT GACGCAGGTC GGCGTCGTCG ACATCACTAA AGTGTCGTCC GGGCTGATGG AGAGTTTTTC GCCTGAGTAC GGCGTGTTCT CACTTCCCTA CCTGTTTGCC ACCGTCGAGG AATACTACCG CGTAATGGAT AACCCACAGG TGATGGAGCC TGTTTATCAG TCCACCGCCG CGCAGGGGTT TATCGGCGTA GGCTGGTATG ATTCCGGTGC GCGTAATTTT TATATGAGCA AAGCGCCGGT TAAACGCATT GAGGATTTAC GCGGGAAAAA GATCCGCGTC ATGCAGAGTG AGACGGCGAT CCAAACCCTC AAACTGCTGG GCGCTTCGCC TATCGCCATG AGCCAGGCGG AGGTCTATAC CTCGTTACAA CAAGGCATTC TCGACGGCGC GGAAAACAAT GAGTTCGCTC TCACCATCGC CCGCCACGGC GAAGTCGCCC GCTATTACAC CTACGATATG CACACCCGCA TTCCCGATAT CCTGTTAATG AGTACCCTCA CGCTGGAAAA GCTGACGCCG GAACAGCAGC GCATCGTCGA AGCCGCCATC AAGGCGTCGA TCGAATTTGA GAAAGCCGCA TGGGACAAGG AAATAGAGAA AACCAGGCTG GCGGCGGTAA AAGATTTCAA CGTTGAATTC TACGAGATCG ACAAAAAACC CTTCCAGAAG GCAGTACAGC CTATTTACGA CGGTCTGAAA AACAAACCGC GGCTTTACGG CCTGTATCAA CGTATCCAGA CAGCAAAAAA TTAA
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Protein sequence | MKQPGFIRLA TLALLSTLSF FSHGETILRL AYAENSQPVK DALHFLGQQV EEKTGGDIKV QYFPDGQLGG ERELVELTQV GVVDITKVSS GLMESFSPEY GVFSLPYLFA TVEEYYRVMD NPQVMEPVYQ STAAQGFIGV GWYDSGARNF YMSKAPVKRI EDLRGKKIRV MQSETAIQTL KLLGASPIAM SQAEVYTSLQ QGILDGAENN EFALTIARHG EVARYYTYDM HTRIPDILLM STLTLEKLTP EQQRIVEAAI KASIEFEKAA WDKEIEKTRL AAVKDFNVEF YEIDKKPFQK AVQPIYDGLK NKPRLYGLYQ RIQTAKN
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