Gene SeD_A4451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4451 
Symbol 
ID6874929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4291645 
End bp4292160 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content51% 
IMG OID642787369 
Producttrap dicarboxylate transporter DctQ subunit 
Protein accessionYP_002217980 
Protein GI198245318 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAT TCAGAAAAGG ACTTGATTTA TTGCTGGGCG CTATCTGTTG CCTGGTGCTG 
GCGATAATGG TGGGCATCGC CTGTTGGCAG GTGGTGAGCC GCTACATTCT GGGCGTTCCC
AGCACCCTTA CCGAAGAGAT GCTGCGATTT CTCCTGGTGT GGGTATCAAT GCTGGGCATG
GCTTTTGTCG CCGGTCAGAA ACAGCATATC AGTCTGACTA TCTTACTGGA TAAGGTGTCG
CCGACGATTC GCGGCTGGTG GAATATCATC CTGCAGGTCA TTTTTATCGC GTTTTCCATT
TGGGTATTGA TTATCGGCGG CTTAAAGATT TCTGCGATTT CTATGCTGCA AATCTCCCCT
GCGCTGGGCA TTCCGATGGG AAAAATTTAT TACGCGCTCC CCTGCGCGGG CGTACTGATC
ATCCTCTATG GGCTGCTGAA TATCGTTGAC GCCCTGAAAG CTATCCATTC CGCCACGGAT
ACCACTGAGC ACACTCTGGA GAAATCACAT GATTGA
 
Protein sequence
MNTFRKGLDL LLGAICCLVL AIMVGIACWQ VVSRYILGVP STLTEEMLRF LLVWVSMLGM 
AFVAGQKQHI SLTILLDKVS PTIRGWWNII LQVIFIAFSI WVLIIGGLKI SAISMLQISP
ALGIPMGKIY YALPCAGVLI ILYGLLNIVD ALKAIHSATD TTEHTLEKSH D