Gene SeD_A4445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4445 
Symbol 
ID6872929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4287851 
End bp4288885 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content53% 
IMG OID642787363 
Productrhamnose-proton symporter 
Protein accessionYP_002217974 
Protein GI198244223 
COG category 
COG ID 
TIGRFAM ID[TIGR00776] RhaT L-rhamnose-proton symporter family protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACG CGATTACGAT GGGTATTTTC TGGCATTTGA TAGGGGCGGC CAGTGCAGCC 
TGCTTCTATG CCCCGTTCAA GCAAGTGAAA CAGTGGTCAT GGGAAACCAT GTGGTCAGTG 
GGCGGCATCG TCTCATGGCT TATTCTGCCG TGGGCAATTA GCGCTCTGTT ACTGCCTGAT 
TTCTGGGCCT ATTATGGGCA GTTTAACCTC TCCACCCTTT TACCGGTTTT TCTGTTCGGC 
GCCATGTGGG GCATCGGCAA TATTAACTAC GGCCTGACCA TGCGTTATCT CGGGATGTCG 
ATGGGTATCG GCATCGCTAT CGGCATTACG CTTATCGTCG GCACGCTGAT GACGCCTATC 
ATCAACGGTA ACTTCGATGT GTTAATCCAT ACCGAAGGGG GGCGCATGAC GCTACTTGGC 
GTTTTTGTCG CGCTGATCGG CGTCGGGATT GTGACGCGCG CCGGACAGTT AAAAGAACGC 
AAAATGGGCA TTAAAGCGGA GGAGTTCAAT CTGAAGAAAG GGCTTCTGCT GGCAGTGATG 
TGCGGTATTT TCTCGGCGGG GATGTCTTTT GCCATGAACG CCGCGAAACC GATGCATGAA 
GCTGCTGCCG CGCTTGGCGT TGACCCGCTC TATGTCGCGC TGCCGAGTTA CGTGGTGATT 
ATGGGCGGCG GCGCGCTGGT GAACCTCGGT TTCTGTTTTA TCCGCCTGGC AAAAGTGCAA 
AATCTGTCGA TAAAAGCCGA CTTCTCGCTG GCAAGACCGT TGATTATCAG CAATATTCTG 
CTGTCCGCGC TTGGCGGTCT GATGTGGTAT TTACAGTTCT TTTTCTACGC CTGGGGTCAC 
GCGCGCATTC CAGCGCAATA TGACTACATG AGCTGGATGC TGCACATGAG CTTCTATGTG 
CTGTGCGGGG GGCTTGTCGG TCTGGTGCTA AAAGAGTGGA AAAATGCTGG CCGCCGTCCC 
GTTGCTGTAT TAAGCCTCGG CTGCGTGGTA ATTATTATCG CGGCGAATAT TGTCGGTTTA 
GGCATGGCCA GTTAA
 
Protein sequence
MSNAITMGIF WHLIGAASAA CFYAPFKQVK QWSWETMWSV GGIVSWLILP WAISALLLPD 
FWAYYGQFNL STLLPVFLFG AMWGIGNINY GLTMRYLGMS MGIGIAIGIT LIVGTLMTPI 
INGNFDVLIH TEGGRMTLLG VFVALIGVGI VTRAGQLKER KMGIKAEEFN LKKGLLLAVM 
CGIFSAGMSF AMNAAKPMHE AAAALGVDPL YVALPSYVVI MGGGALVNLG FCFIRLAKVQ 
NLSIKADFSL ARPLIISNIL LSALGGLMWY LQFFFYAWGH ARIPAQYDYM SWMLHMSFYV 
LCGGLVGLVL KEWKNAGRRP VAVLSLGCVV IIIAANIVGL GMAS