Gene SeD_A4437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4437 
Symbol 
ID6875045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4279810 
End bp4280358 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content60% 
IMG OID642787355 
ProductXRE family transcriptional regulator 
Protein accessionYP_002217966 
Protein GI198244893 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAC CTATTAGCGT CATTGCCAGA AGTCTGGTAC GCGAACGCCA GCGAACCGGA 
CTGTCGCTGG CGGAGATTGC GCGGCGCGCA GGCATCGCTA AATCTACGCT TTCACAACTG
GAAGCAGGGA ACGGCAACCC CAGCCTGGAG ACGTTATGGT CGCTATGCGT CGCGCTCGAC
ATTCCCTTTG CCAGGCTGCT GGAGCCGCAG GTACAAAAAA CGCAGGTGAT TCGCCGCGGA
GAAGGCACCA AAGTGGTGGC GGAGCAGGCG CATTATCAGG CGATATTACT GGCGGCGTGT
CCGCCCGGCG CGCGGCGTGA TATCTATCTG CTGTTGACGC AGCCGGGGGC CGACCGGATC
TCTCACCCGC ATCCGCCGGG GTCGGTGGAA CATATTATTG TGACGCAGGG AAAAGCCCTC
GTCGGCTTAA CCGAGGCGCC GGAAGAGCTG GCGGAGGGCG ATTACATTTG TTATCCCGGC
GACCAGGCGC ATATCTTTAA AGCGCTGGAA CCGGATACTC AGGCTATCCT GGTAGCGGAG
CAGAATTGA
 
Protein sequence
MTQPISVIAR SLVRERQRTG LSLAEIARRA GIAKSTLSQL EAGNGNPSLE TLWSLCVALD 
IPFARLLEPQ VQKTQVIRRG EGTKVVAEQA HYQAILLAAC PPGARRDIYL LLTQPGADRI
SHPHPPGSVE HIIVTQGKAL VGLTEAPEEL AEGDYICYPG DQAHIFKALE PDTQAILVAE
QN