Gene SeD_A4431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4431 
Symbol 
ID6871083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4276057 
End bp4277088 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content44% 
IMG OID642787349 
Productputative inner membrane lipoprotein 
Protein accessionYP_002217960 
Protein GI198243669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.362505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG ATTTGTTATC ATCAATTATT ATCGCTATGC TGATGACTGC CGGGCTAAGC 
GCTTGTGATG AAAAAAAAGC GGACGAACAA CCTGTAGCTC AGAGTGCGGA CTCATCAGCG 
AGCAATACAC AATCCACATC AGCGGAAAGC GCAGATGCGA ACGATGTTCT TAACCAAAAG 
CTAAATGTTT ACATTGATTG TTATAATAAT CTCCAGGCAG GTATTTACCG CGCTGTAAAT 
CGTTATGCTA ACACATTCGA CGATTTCCGC ACCGGTCCTA CCGGTAAGGA AGACGATCCC 
TCTCCGCTGG TTCCTGTGTA TCCTGCACTT ATCCAGGACT GCCGGAAAGA CATCAAGGCG 
GCGGCTGAAT TAAAGCCGGC GTTTGCCTCT CTGGATAGTG CTGCTCTGGC ATTTATTAAT 
GCGGCTGGAC CACTAGCTGA AACAATCAAT AGTATGAATA AATACTATGA TCAAGATAAC 
TTCAAGGATG ATGCCTTTGC TGGCGCTAAA GCGTTCCATA AAACGTTTAT AAAACAGTTC 
GATGAGTTTG ATCCCATTGC GAAGAAATAT ATCGCCGAGA TTACCATTAT GAGTGGGCAG 
CATGCGGCTA ATGAAATTAA GGCGACCGAG AAGAAAGAAG GTAAATCCAT TAAGTACTAT 
ACGCTTTTGA CGATGCAGGA AGCCGAGACG CTTAATGACG CTGTAGCTGA TGATTCTTTT 
GATGTGGCGG CAGTAAGCAA ACAGCTCGCT GATTTTGAAG AGCATACTCA GAAGCTAAAC 
GAGAAGATCA ACGTTGATAT AGATAAACAT CGTAGCTTCC CTGGTTTTAT TTCTGAGCTG 
GAAAAATTCC AGGGCAAGGT GAAAAAACGC ATTCGGCGCG TGCGCGATAA CGTGGCGTAT 
ACCTCGCATG AGCAGGACTA CCTCAATAGC GGCAGCGGTG ATATGGTAGA TGGTTCTTAT 
GAGGCTGTGG TTAAAGCTTA TAACGAGCTC ATCGATACCT ATAATGGCTA TCATCTTGAG 
CGTGAGTTCT AA
 
Protein sequence
MKKDLLSSII IAMLMTAGLS ACDEKKADEQ PVAQSADSSA SNTQSTSAES ADANDVLNQK 
LNVYIDCYNN LQAGIYRAVN RYANTFDDFR TGPTGKEDDP SPLVPVYPAL IQDCRKDIKA 
AAELKPAFAS LDSAALAFIN AAGPLAETIN SMNKYYDQDN FKDDAFAGAK AFHKTFIKQF 
DEFDPIAKKY IAEITIMSGQ HAANEIKATE KKEGKSIKYY TLLTMQEAET LNDAVADDSF 
DVAAVSKQLA DFEEHTQKLN EKINVDIDKH RSFPGFISEL EKFQGKVKKR IRRVRDNVAY 
TSHEQDYLNS GSGDMVDGSY EAVVKAYNEL IDTYNGYHLE REF