| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4430 |
|---|
| Symbol | fdhD |
|---|
| ID | 6872558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 4274953 |
|---|
| End bp | 4275789 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642787348 |
|---|
| Product | formate dehydrogenase accessory protein |
|---|
| Protein accession | YP_002217959 |
|---|
| Protein GI | 198241873 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.141571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 84 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACAATA TACTGTCTGA AGAAGTCCTA AATGTGACTG ATTTCACAAC CTCACGCCAG
TTGACTCTCT GGAAACGCGA GGATTTGCAG TCCCCCCAAC TTGATGATGT TGCCGAGGAA
GTGCCTGTGG CACTGGTGTA TAACGGCATT TCGCATGTTG TTATGATGGC CTCTCCGAAA
GATCTGACGC ATTTCGCAAT GGGGTTTTCT CTGTCGGAAG GGATCATTGA CAGCCCGCGT
GAAATCTATG GCATGGACGT TGTACCGTCC TGTAACGGAC TTGAAGTGCA GATTGATCTT
TCCAGCCGTC GATTTATGGG GCTGAAAGCG CGTCGTCGCG CGCTGGCCGG ACGCACCGGT
TGCGGCGTGT GTGGCGTGGA ACAGCTCAAT GACATCGGTA AGCCGGTGCA ACCGCTGCCG
TTTAGCCAAA CGTTTAATCT CGGTAACCTT GATCGCGCGT TAAAACATCT GAATGATTTT
CAACCGACGG GTAAGCTGAC GGGTTGTACG CACGCTGCGG CGTGGGTCAT GCCGTCGGGT
GAACTGGCGG GGGGCCATGA AGATGTCGGA CGCCACGTTG CGCTGGATAA ACTGCTCGGC
CGCCGCGCTA CGGAAGGTGA GGAATGGCGG CAAGGCGCGG CGCTGGTTTC CAGTCGTGCG
AGTTACGAAA TGGTGCAGAA GTCGGCGATG TGCGGTGTGG AAATTTTGTT TGCGGTTTCT
GCTGCTACCA CGCTCGCGGT TGACGTCGCT GAACGGTGTA ATCTTACGCT GGTGGGGTTC
TGTAAGCCGG GTCGGGCGAC GATTTATACC CATCCGCAGC GGTTAATCGC AGACTAA
|
|---|
| Protein sequence | MNNILSEEVL NVTDFTTSRQ LTLWKREDLQ SPQLDDVAEE VPVALVYNGI SHVVMMASPK
DLTHFAMGFS LSEGIIDSPR EIYGMDVVPS CNGLEVQIDL SSRRFMGLKA RRRALAGRTG
CGVCGVEQLN DIGKPVQPLP FSQTFNLGNL DRALKHLNDF QPTGKLTGCT HAAAWVMPSG
ELAGGHEDVG RHVALDKLLG RRATEGEEWR QGAALVSSRA SYEMVQKSAM CGVEILFAVS
AATTLAVDVA ERCNLTLVGF CKPGRATIYT HPQRLIAD
|
|---|
| |