Gene SeD_A4419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4419 
Symbol 
ID6875620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4266599 
End bp4267027 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content47% 
IMG OID642787339 
Producthypothetical protein 
Protein accessionYP_002217950 
Protein GI198244133 
COG category[K] Transcription 
COG ID[COG5499] Predicted transcription regulator containing HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0395742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones93 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCAA CCAGCGCAAA AAAGATCGTT GATACCTTCA GCGATGCGGT AAAAACCGTC 
CCACTGATGG GGGAAGACCG AAATGACAAT GAGTATCGCA GGGCACTAGC GCTAGTGGAG 
TTTCTGGTCG ACCACGACGA TCTTGAAAAC CCACTATTTG AATTGCTCTG TGCCCGAATC 
AGTGAATACG AAAAACATGC GCCGGAATTC AAATCACTCA ACCAACACCT GGAGAAAACA 
CCCCCTGGCG TTTCAGTATT GCGAACGCTC ATGGATCAAT ACGGTCTCAA AGCAGCAGAT 
CTTGCCAACG AACTTGGTTC TAAATCGAAC GTCAGCAACA TCTTAAATGG CCGCAGAGCA 
CTAACGGTTA ATCATATCAA AGCGCTTACA CAACGCTTTA AACTACCAGC GGATGCCTTC 
ATCGAGTAG
 
Protein sequence
MDATSAKKIV DTFSDAVKTV PLMGEDRNDN EYRRALALVE FLVDHDDLEN PLFELLCARI 
SEYEKHAPEF KSLNQHLEKT PPGVSVLRTL MDQYGLKAAD LANELGSKSN VSNILNGRRA 
LTVNHIKALT QRFKLPADAF IE