Gene SeD_A4415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4415 
SymbolyihX 
ID6873547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4263699 
End bp4264298 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content50% 
IMG OID642787335 
Productphosphatase 
Protein accessionYP_002217946 
Protein GI198244807 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02247] Epoxide hydrolase N-terminal domain-like phosphatase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTACA TCTTTGATTT AGGTAATGTG ATTGTCGACA TCGACTTTAA CCGCGTATTA 
GGTGTGTGGA GCGACCTGAG TCGAGTACCG CTGGCTTCGC TGAAGCAAAA ATTTACGATG
GGCGAGACTT TTCACCAACA TGAACGCGGT GAGATAACGG ACGAAGCGTT TGCTGAAGCT
TTCTGTCATG AAATGGCGTT ATCGCTCAGT TATGAACAAT TTGCGCACGG CTGGCAGGCG
GTATTTGTCG GATTACGGCC CGAAGTGATT GCTATCATGC ATAAACTGCG CGAGCAGGGG
CATCGCGTGG TGGTGCTATC CAATACTAAC CGACTGCATA CCCACTTCTG GCCGGAAGAA
TATCCGGAGG TGCGCGCTGC CGCCGACCAT ATTTATTTAT CCCAGGATTT GGGAATGCGT
AAGCCGGAAG CGCGTATTTA TCAGCACGTC CTGCAGAAAG AAGGTTTTTC TGCTGCCGAT
GCGGTCTTTT TCGACGACAA TGCCGATAAT ATAGAAGGGG CCAACCAGTT GGGGATCACC
AGCATTCTGG TGAAGGATAA AGCCACCATC CCTGACTATT TCGCGAAGCT GTTATGCTAA
 
Protein sequence
MLYIFDLGNV IVDIDFNRVL GVWSDLSRVP LASLKQKFTM GETFHQHERG EITDEAFAEA 
FCHEMALSLS YEQFAHGWQA VFVGLRPEVI AIMHKLREQG HRVVVLSNTN RLHTHFWPEE
YPEVRAAADH IYLSQDLGMR KPEARIYQHV LQKEGFSAAD AVFFDDNADN IEGANQLGIT
SILVKDKATI PDYFAKLLC