Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4415 |
Symbol | yihX |
ID | 6873547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4263699 |
End bp | 4264298 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642787335 |
Product | phosphatase |
Protein accession | YP_002217946 |
Protein GI | 198244807 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR02247] Epoxide hydrolase N-terminal domain-like phosphatase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTACA TCTTTGATTT AGGTAATGTG ATTGTCGACA TCGACTTTAA CCGCGTATTA GGTGTGTGGA GCGACCTGAG TCGAGTACCG CTGGCTTCGC TGAAGCAAAA ATTTACGATG GGCGAGACTT TTCACCAACA TGAACGCGGT GAGATAACGG ACGAAGCGTT TGCTGAAGCT TTCTGTCATG AAATGGCGTT ATCGCTCAGT TATGAACAAT TTGCGCACGG CTGGCAGGCG GTATTTGTCG GATTACGGCC CGAAGTGATT GCTATCATGC ATAAACTGCG CGAGCAGGGG CATCGCGTGG TGGTGCTATC CAATACTAAC CGACTGCATA CCCACTTCTG GCCGGAAGAA TATCCGGAGG TGCGCGCTGC CGCCGACCAT ATTTATTTAT CCCAGGATTT GGGAATGCGT AAGCCGGAAG CGCGTATTTA TCAGCACGTC CTGCAGAAAG AAGGTTTTTC TGCTGCCGAT GCGGTCTTTT TCGACGACAA TGCCGATAAT ATAGAAGGGG CCAACCAGTT GGGGATCACC AGCATTCTGG TGAAGGATAA AGCCACCATC CCTGACTATT TCGCGAAGCT GTTATGCTAA
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Protein sequence | MLYIFDLGNV IVDIDFNRVL GVWSDLSRVP LASLKQKFTM GETFHQHERG EITDEAFAEA FCHEMALSLS YEQFAHGWQA VFVGLRPEVI AIMHKLREQG HRVVVLSNTN RLHTHFWPEE YPEVRAAADH IYLSQDLGMR KPEARIYQHV LQKEGFSAAD AVFFDDNADN IEGANQLGIT SILVKDKATI PDYFAKLLC
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