Gene SeD_A4411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4411 
Symbol 
ID6874955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4260714 
End bp4261610 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content57% 
IMG OID642787331 
Product3-hydroxyisobutyrate dehydrogenase family protein 
Protein accessionYP_002217942 
Protein GI198246152 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTTA TAGCATTTAT CGGGTTGGGA CAGATGGGCT CCCCTATGGC GAGCAATCTG 
CTAAAGCAGG GCCATCAACT CAGCGTCTTC GATGTTAATC CCGACGCCGT ACAGCGTCTG
GTAGACAAAG GCGCGCAACC TGCAAGCAGC CCGGCTCAGG CAACCATCGG CGCTGAATTT
GTTATCACCA TGCTCCCGAA CGGCGATCTG GTTCGTTCCG TTTTGTTTGG CGAGCAAGGC
GTTTGTGAAA CTCTTTCCCG TGAAGCGCTG GTCATTGATA TGTCCACTAT TCATCCGTTG
CAAACCGATA AGCTGATTGC CGACATGCAG AGCAAAGGGT TCAGCATGAT GGATGTGCCG
GTAGGCCGGA CATCCGACAA CGCGATTACC GGCACATTGT TGCTGCTGGC AGGCGGTACG
GCGGAGCAAG TAGAGCGTGC TACCCCTGTT CTGATGGCGA TGGGTAATGA GCTGGTCAAC
ACCGGCGGCC CGGGAATGGG TATTCGCGTA AAACTGATCA ACAACTACAT GAGTATTGCG
CTAAATGCGC TCTCCGCCGA AGCCGCCGTG CTGTGTGAAG CGCTGGGGCT TTCCTTCGAC
GTGGCTTTAA AAGTGATGAG CGGCACTGCC GCAGGCAAAG GGCATTTCAC CACCACCTGG
CCGAATAAAG TGATGAAAGG GGATCTGTCT CCCGCCTTCA TGATCGATCT GGCGCACAAA
GATCTTGGCA TCGCGTTGGA TGTCGCCAAT CAACTGCACG TCCCGATGCC GCTCGGCGCC
GCCTCCCGTG AAGTTTATAA CCTGGCGCGG GCCGCAGGCC GCGGTCGGGA AGACTGGAGC
GCCATCCTGG AACAGGTGCG CATCAGCGCC GGGCTGACCG CCAACGTAAA AAAGTAA
 
Protein sequence
MAVIAFIGLG QMGSPMASNL LKQGHQLSVF DVNPDAVQRL VDKGAQPASS PAQATIGAEF 
VITMLPNGDL VRSVLFGEQG VCETLSREAL VIDMSTIHPL QTDKLIADMQ SKGFSMMDVP
VGRTSDNAIT GTLLLLAGGT AEQVERATPV LMAMGNELVN TGGPGMGIRV KLINNYMSIA
LNALSAEAAV LCEALGLSFD VALKVMSGTA AGKGHFTTTW PNKVMKGDLS PAFMIDLAHK
DLGIALDVAN QLHVPMPLGA ASREVYNLAR AAGRGREDWS AILEQVRISA GLTANVKK