Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4411 |
Symbol | |
ID | 6874955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 4260714 |
End bp | 4261610 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642787331 |
Product | 3-hydroxyisobutyrate dehydrogenase family protein |
Protein accession | YP_002217942 |
Protein GI | 198246152 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTTA TAGCATTTAT CGGGTTGGGA CAGATGGGCT CCCCTATGGC GAGCAATCTG CTAAAGCAGG GCCATCAACT CAGCGTCTTC GATGTTAATC CCGACGCCGT ACAGCGTCTG GTAGACAAAG GCGCGCAACC TGCAAGCAGC CCGGCTCAGG CAACCATCGG CGCTGAATTT GTTATCACCA TGCTCCCGAA CGGCGATCTG GTTCGTTCCG TTTTGTTTGG CGAGCAAGGC GTTTGTGAAA CTCTTTCCCG TGAAGCGCTG GTCATTGATA TGTCCACTAT TCATCCGTTG CAAACCGATA AGCTGATTGC CGACATGCAG AGCAAAGGGT TCAGCATGAT GGATGTGCCG GTAGGCCGGA CATCCGACAA CGCGATTACC GGCACATTGT TGCTGCTGGC AGGCGGTACG GCGGAGCAAG TAGAGCGTGC TACCCCTGTT CTGATGGCGA TGGGTAATGA GCTGGTCAAC ACCGGCGGCC CGGGAATGGG TATTCGCGTA AAACTGATCA ACAACTACAT GAGTATTGCG CTAAATGCGC TCTCCGCCGA AGCCGCCGTG CTGTGTGAAG CGCTGGGGCT TTCCTTCGAC GTGGCTTTAA AAGTGATGAG CGGCACTGCC GCAGGCAAAG GGCATTTCAC CACCACCTGG CCGAATAAAG TGATGAAAGG GGATCTGTCT CCCGCCTTCA TGATCGATCT GGCGCACAAA GATCTTGGCA TCGCGTTGGA TGTCGCCAAT CAACTGCACG TCCCGATGCC GCTCGGCGCC GCCTCCCGTG AAGTTTATAA CCTGGCGCGG GCCGCAGGCC GCGGTCGGGA AGACTGGAGC GCCATCCTGG AACAGGTGCG CATCAGCGCC GGGCTGACCG CCAACGTAAA AAAGTAA
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Protein sequence | MAVIAFIGLG QMGSPMASNL LKQGHQLSVF DVNPDAVQRL VDKGAQPASS PAQATIGAEF VITMLPNGDL VRSVLFGEQG VCETLSREAL VIDMSTIHPL QTDKLIADMQ SKGFSMMDVP VGRTSDNAIT GTLLLLAGGT AEQVERATPV LMAMGNELVN TGGPGMGIRV KLINNYMSIA LNALSAEAAV LCEALGLSFD VALKVMSGTA AGKGHFTTTW PNKVMKGDLS PAFMIDLAHK DLGIALDVAN QLHVPMPLGA ASREVYNLAR AAGRGREDWS AILEQVRISA GLTANVKK
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