Gene SeD_A4402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4402 
Symbol 
ID6874460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4249917 
End bp4250903 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content50% 
IMG OID642787322 
Producthypothetical protein 
Protein accessionYP_002217933 
Protein GI198243653 
COG category[H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.251004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTACGC TCATTGGCCC CCGTCAGAGC AAGCGCACGC ATTATTTTAT GCAGGCTGCC 
GCCGTACTTG GGGAACCCGT CACGGCGCTG ACTCATCCGC AAGCGCTGGA CGCTTCGCTG
ACCTCTGGCA TCGTTAAAAT CGACCCGCCA GTACACAGTG AAACAGACAT CCGCAAAATA
AACGCGATCG GTCTGGACTA TATCCATTTT TTGCAGAACA TGGCGGCGCG TCCTGGCGTC
ACCTGGCTTA ACCATCCGGC GGGCCTCATT CACCTGTTGG ATAAAAAACT CTGCAAGCGG
CGCTTACTGG AACACGGCAT CCCCACGCCG CCGTTGGTAG CGGAAGACGT AAAAAGTTTT
GTACAGCTCA CCGCCATCAT GGAGGAAAAA AGGGTCGCCA GCGTGTTCAT TAAGCCCTCG
CTGGGTTCTG GCGCGGCGGG CGTTATCGCT TTGCGCCGCC ACCCTGATGG CATAAAGCAG
GTGCTTTACA GCGCGATTGC CATATCAGGA CAACAGCTAT TTAACAGCAA AAAAATCCAA
CAGTATCGTC AGAAAGAAGA TATCCAGCTC ATTATTGATG GCGTTCTTCA GCAGGAAAAC
CTCGTCGAAC AGTGGCTGCC CAAAGCCAGC GTAAAGCATA AAACCTATGA TTTACGCATC
GTCTGCCTGG ATGGCGAAAT TATCTGGCGA GTGGTCAGAA CCTCCTCGCA GCCCATTACT
AACTTACATC TGCAAAACCA GGCTTACTGC TTCGAAAGTC TGGAGTTATC TGCCGCAAAA
GCGACTGAGA TCGATACGCT CTGTCAAAAT GCCATGCGGC TTTTTCCTGG CATTCGCTTA
GCGGGTATTG ATGTTTTACT TACTACCAGC CTGACGCCGT ATATTATTGA AATTAATGGC
CAGGGTGATT TGATTTATCA GGATGCGCAG CAGAATAATC TAATTTATCA GGCGCAAATC
CGGGCCATGA GGAAGCAAAA TGTATAA
 
Protein sequence
MITLIGPRQS KRTHYFMQAA AVLGEPVTAL THPQALDASL TSGIVKIDPP VHSETDIRKI 
NAIGLDYIHF LQNMAARPGV TWLNHPAGLI HLLDKKLCKR RLLEHGIPTP PLVAEDVKSF
VQLTAIMEEK RVASVFIKPS LGSGAAGVIA LRRHPDGIKQ VLYSAIAISG QQLFNSKKIQ
QYRQKEDIQL IIDGVLQQEN LVEQWLPKAS VKHKTYDLRI VCLDGEIIWR VVRTSSQPIT
NLHLQNQAYC FESLELSAAK ATEIDTLCQN AMRLFPGIRL AGIDVLLTTS LTPYIIEING
QGDLIYQDAQ QNNLIYQAQI RAMRKQNV