Gene SeD_A4401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4401 
Symbol 
ID6873494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4249049 
End bp4249924 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content46% 
IMG OID642787321 
Productputative membrane-associated metal-dependent hydrolase 
Protein accessionYP_002217932 
Protein GI198245036 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.483513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAATT CAATGGATGA AGTCCCCGTC TCGCTACACG CGTCGATTGA CACAGGCGAT 
GGCGAATTCG ATATGAATAC GCTAATTAGT AATAACGCTC ATATTCTTTT TATTGTGCTG 
GACTCGTTAC GCTACGATAT TGCGCTTCAG GAACAAACCG CCGGAAATAC GCCCAACCTT 
AATCATTATG GACAATGGAC GAAATGCGAG GCGGCCGGTA ATTTTACCTG GCCTTCGCAT 
CACGCCATGT TTTCAGGTTT TATGCCAAAA CCTATTGATG ATACCGTTAA TCAGACCATG 
CTGTTTTTCC CAAAAGATAT CGGACTTGGT CGTAAAGGGC CGAAAAATGC ATTTGCCTTT 
GATGACGCAA CATGGATAAA AAGTCTGGAA AATAAAGGCT ACCAGACCAT CTGTATTGGC 
GGCGTCTCTT TCTTTAATAA CCGCTCCGGC ATGGGAAAAG TGTTCCCGTC GATGTTTAAA 
GAGAGTTACT GGCATCCACG CTTTGCCTGT ACGGTTAAAG AGAGTATGGA TAACCAGATC 
CATTATATCC AGAAAATCAT GGCCGAACGT GCTGGCAGCC AACCGGTCAT GATGTATATC 
AATATCGACA CGATTCATTA CCCTAACCAT TTTTACGTGG AGGGCGCGGC CCCTGGCGAT 
ACCGTTGAGA CTCATGCCGC CGCGCTACGC TATATCGACG CCCGCATCGA CGGATTACTA 
AACATTTTCC GCCAAACCGG CGGCGAAACG TTCGTTATTG TCTGCTCCGA TCACGGTACC 
TGCTATGGCG AAGACGGGAA ATATTTCCAT AGTTTTAATC ATCCGATCGT TAATACCGTT 
CCCTATATGC ATTTCTTGCT GAGCTGTAAT CATTAA
 
Protein sequence
MYNSMDEVPV SLHASIDTGD GEFDMNTLIS NNAHILFIVL DSLRYDIALQ EQTAGNTPNL 
NHYGQWTKCE AAGNFTWPSH HAMFSGFMPK PIDDTVNQTM LFFPKDIGLG RKGPKNAFAF 
DDATWIKSLE NKGYQTICIG GVSFFNNRSG MGKVFPSMFK ESYWHPRFAC TVKESMDNQI 
HYIQKIMAER AGSQPVMMYI NIDTIHYPNH FYVEGAAPGD TVETHAAALR YIDARIDGLL 
NIFRQTGGET FVIVCSDHGT CYGEDGKYFH SFNHPIVNTV PYMHFLLSCN H