Gene SeD_A4370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4370 
SymbolpepQ 
ID6874557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp4218687 
End bp4220018 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content53% 
IMG OID642787294 
Productproline dipeptidase 
Protein accessionYP_002217910 
Protein GI198242585 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCAC TGGCCGCGCT CTATAAAAAT CATATTGTTA CCTTACAAGA ACGGACGCGC 
GATGTTCTGG CGCGCTTTAA GCTGGATGCG TTACTTATTC ATTCCGGCGA GCTTTTCAAC 
GTCTTTCTCG ACGATCACCC TTATCCGTTT AAGGTCAATC CGCAGTTTAA AGCGTGGGTG 
CCGGTAACTC AGGTTCCAAA TTGCTGGCTG CTGGTCGATG GCGTCAACAA ACCCAAATTG 
TGGTTTTATC TGCCGGTCGA TTACTGGCAT AACGTTGAAC CGCTGCCAAC GTCATTCTGG 
ACAGAAGAAG TCGAGGTCGT CGCCTTACCG AAAGCGGATG GCATCGGCAG CCAACTGCCT 
GCCGCGCGTG GCAATATCGG CTATATCGGC CCGGTTCCTG AGCGCGCGCT ACAATTGGAT 
ATCGCCGCCA GCAACATCAA CCCGAAAGGT GTTATCGACT ATCTGCATTA CTACCGCGCC 
TATAAAACGG ATTATGAACT GGCCTGTATG CGCGAAGCGC AGAAAATGGC GGTGAGCGGT 
CATCGGGCGG CGGAAGAGGC CTTCCGTTCC GGCATGAGTG AGTTCGACAT CAACCTGGCG 
TACCTGACCG CCACGGGACA TCGCGATACT GATGTTCCAT ACAGCAACAT TGTGGCGCTG 
AACGAACATG CCGCCGTGCT GCATTACACG AAACTGGATC ATCAGGCACC GTCTGAAATG 
CGCAGTTTCC TGCTGGATGC GGGCGCGGAA TACAATGGCT ACGCGGCGGA TCTGACGCGG 
ACCTGGTCGG CGAAAAGCGA TAACGACTAC GCCCACCTGG TGAAAGATGT TAACGACGAA 
CAGTTGGCGC TGATCGCTAC CATGAAGGCG GGCGTCAGCT ATGTGGATTA TCATATTCAG 
TTCCATCAAC GTATCGCGAA GCTGCTGCGT AAACATCAAA TCATTACCGA CATGAGTGAA 
GAGGCGATGG TGGAAAATGA TCTTACCGGG CCGTTTATGC CGCACGGTAT TGGTCATCCG 
TTGGGTCTGC AGGTACACGA TGTGGCCGGG TTTATGCAGG ATGATTCCGG TACGCATCTC 
GCTGCACCGT CCAAATACCC GTATCTGCGC TGCACGCGTG TGTTACAGCC GCGAATGGTG 
TTGACCATCG AACCGGGGAT TTACTTCATC GAATCGCTGT TAGCGCCGTG GCGCGAAGGC 
CCGTTCAGCA AGCACTTCAA CTGGCAGAAA ATTGAAGCGC TCAAGCCTTT CGGCGGTATT 
CGCATTGAAG ATAACGTGGT CATCCACGAA AACGGCGTGG AAAACATGAC GCGGGATTTA 
AAACTGGCGT AA
 
Protein sequence
MESLAALYKN HIVTLQERTR DVLARFKLDA LLIHSGELFN VFLDDHPYPF KVNPQFKAWV 
PVTQVPNCWL LVDGVNKPKL WFYLPVDYWH NVEPLPTSFW TEEVEVVALP KADGIGSQLP 
AARGNIGYIG PVPERALQLD IAASNINPKG VIDYLHYYRA YKTDYELACM REAQKMAVSG 
HRAAEEAFRS GMSEFDINLA YLTATGHRDT DVPYSNIVAL NEHAAVLHYT KLDHQAPSEM 
RSFLLDAGAE YNGYAADLTR TWSAKSDNDY AHLVKDVNDE QLALIATMKA GVSYVDYHIQ 
FHQRIAKLLR KHQIITDMSE EAMVENDLTG PFMPHGIGHP LGLQVHDVAG FMQDDSGTHL 
AAPSKYPYLR CTRVLQPRMV LTIEPGIYFI ESLLAPWREG PFSKHFNWQK IEALKPFGGI 
RIEDNVVIHE NGVENMTRDL KLA