Gene SeD_A4350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4350 
SymbolmetR 
ID6872421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4195617 
End bp4196570 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content59% 
IMG OID642787275 
Producttranscriptional regulator MetR 
Protein accessionYP_002217891 
Protein GI198244874 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAA TTAAACATCT GAAAACACTC CAGGCATTGC GGAATAGTGG ATCGCTGGCT 
GCCGCGGCGG CGGTGCTGCA CCAGACCCAA TCCGCTCTGT CTCATCAGTT CAGCGATCTG 
GAACAACGCC TTGGCTTCCG CCTGTTCGTG CGTAAAAGCC AGCCGCTGCG CTTTACGCCG 
CAGGGGGAAG TTCTGCTGCA ACTGGCAAAC CAGGTGCTGC CGCAAATCAG CCGTGCGCTG 
CAGGCGTGCA ACAAACCGCA GCAAACTCGT CTGCGCATCG CTATTGAATG TCATAGCTGT 
ATTCAGTGGC TGACCCCGGC GCTGGAAAAC TTCCGTGCAA GCTGGCCGCA GGTAGAAATG 
GATTTCACAT CCGGCGTCAC TTTTGATCCG CAACCGGCCT TGCAACAAGG CGAGCTGGAT 
TTGGTGATGA CGTCGGATAT TTTGCCGCGC AGCGGGCTGC ATTATTCGCC GATGTTTGAT 
TTTGAAGTCC GACTGGTGCT GGCGCCCGAC CATCCGCTGG CTAGCAAAAC GCAGATTACG 
CCGGAAGATT TAGCCAGCGA AACGCTGTTG ATTTACCCGG TGCAGCGCAG CCGACTGGAT 
GTCTGGCGAC ATTTCCTGCA ACCGGCGGGT ATCAGTCCGC TGCTGAAAAG CGTGGATAAT 
ACGCTACTGC TGATTCAGAT GGTGGCGGCC AGAATGGGCA TTGCCGCCCT GCCGCACTGG 
GTGGTGGAAA GCGTTGAGCG CCAGGGTCTG GTGGTGACCA AAACCCTGGG CGATGGTCTG 
TGGAGCCGCC TGTATGCCGC CGTGCGCGAC GGCGACCAGC GTCAGGCGGT GACCGAGGCG 
TTTATTCGCT CGACGCGGGA TCACGCCTGC GATCATCTGC CGTTTGTGCG GAGCGCGGAG 
CGACCCATTT TCGATGCACC CACAGCGAAG CCAGGATCAC AGCCGCGCCT GTAA
 
Protein sequence
MIEIKHLKTL QALRNSGSLA AAAAVLHQTQ SALSHQFSDL EQRLGFRLFV RKSQPLRFTP 
QGEVLLQLAN QVLPQISRAL QACNKPQQTR LRIAIECHSC IQWLTPALEN FRASWPQVEM 
DFTSGVTFDP QPALQQGELD LVMTSDILPR SGLHYSPMFD FEVRLVLAPD HPLASKTQIT 
PEDLASETLL IYPVQRSRLD VWRHFLQPAG ISPLLKSVDN TLLLIQMVAA RMGIAALPHW 
VVESVERQGL VVTKTLGDGL WSRLYAAVRD GDQRQAVTEA FIRSTRDHAC DHLPFVRSAE 
RPIFDAPTAK PGSQPRL