| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4347 |
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| Symbol | rhtB |
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| ID | 6871852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 4192186 |
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| End bp | 4192806 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642787273 |
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| Product | homoserine/homoserine lactone efflux protein |
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| Protein accession | YP_002217889 |
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| Protein GI | 198244382 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.499409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCTTTG AATGGTGGTT CGCCTATCTA CTGACCTCAA CTCTGCTGAG TCTTTCTCCG
GGTTCAGGCG CCATCAATAC CATGACGACG TCTATCAACC ATGGATATCG TGGCGCAGTG
GCTTCTATCG CCGGACTCCA GACCGGGCTG GGGATACATA TCGTACTGGT GGGCGTCGGA
CTGGGTACGC TCTTTTCGCG CTCGCTCATC GCTTTTGAAA TCCTGAAATG GGCTGGCGCG
GCTTATCTTA TCTGGCTGGG TATTCAGCAG TGGCGCGCCG CAGGCGCTAT CGATCTGCAT
ACTCTCGCCC AGACGCAATC ACGGGGTCGG CTCTTCAAAC GGGCGATATT TGTCAATCTA
ACCAATCCCA AAAGCATTGT CTTTCTTGCC GCCCTGTTTC CGCAATTCAT CATGCCGCAG
CAACCGCAAC TGGCGCAGTA CCTCATTCTC GGCGTCACCA CGATTGTGGT GGATATGATT
GTGATGACCG GTTACGCCAC GCTGGCGCAG CGCATTGCCG CCTGGATTAA AGGACCAAAG
CAGATGAAGG CGCTGAATAA AGCGTTTGGT TCGTTGTTTA TGCTGGTAGG CGCGCTCCTG
GCGTCGGCAA GACACGCGTG A
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| Protein sequence | MTFEWWFAYL LTSTLLSLSP GSGAINTMTT SINHGYRGAV ASIAGLQTGL GIHIVLVGVG
LGTLFSRSLI AFEILKWAGA AYLIWLGIQQ WRAAGAIDLH TLAQTQSRGR LFKRAIFVNL
TNPKSIVFLA ALFPQFIMPQ QPQLAQYLIL GVTTIVVDMI VMTGYATLAQ RIAAWIKGPK
QMKALNKAFG SLFMLVGALL ASARHA
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