Gene SeD_A4342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4342 
SymbolrarD 
ID6871293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4187117 
End bp4188004 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content53% 
IMG OID642787268 
ProductRarD protein 
Protein accessionYP_002217884 
Protein GI198244767 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID[TIGR00688] rarD protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAA AACAAACACG GCAGGGCGTA TTACTCGCTC TTGCCGCCTA TTTTATTTGG 
GGGATCGCCC CCGCGTATTT CAAGCTGATC TATTACGTTC CCGCAGATGA GATCCTGACG 
CACCGCGTGA TTTGGTCATT TTTCTTTATG GTGGCGCTGC TTAGCGTCAG CCGGCAGTGG 
CGACAGGTTA AGCGCTTACT GAAAACGCCA AAGAAGATTT TCCTGCTGGC CCTGTCCGCC 
GTACTGGTCG GCGGTAACTG GCTATTATTC ATTTGGGCGG TAAATAATCA CCATATGCTG 
GAGGCCAGCC TGGGTTATTT CATTAATCCA CTGGTTAACA TCTTGCTGGG GATGATTTTT 
CTTGGCGAAC GCTTCCGTCG AATGCAGTGG CTGGCGGTGA TTCTGGCGGT GTGCGGCGTG 
CTGGTGCAAC TCTGGACGTT TGGTTCACTG CCGATTATCG CGCTGGGGCT GGCGTTTAGT 
TTTGCGTTTT ACGGCCTGGT GCGTAAGAAG ATCGCCGTTG AAGCGCAGAC GGGTATGCTG 
GTCGAAACGC TATGGCTGTT GCCGGTCGCG GCAATTTATC TGTTTGGCAT CGCCGATAGC 
CCTACCAGCC ATATGGGACA AAACGCACTA TCGTTGAACT TGCTGTTAAT GGCGGCGGGT 
GTGGTCACTA CGATTCCGCT GCTGTGCTTC ACCGGAGCGG CTACGCGTCT GCGTCTTTCT 
ACACTGGGCT TTTTCCAGTA TATCGGCCCA ACGCTGATGT TTTTACTGGC GGTGACGTTT 
TATGGCGAAG TGCCGGGCGC GGATAAGATG GTGACATTTG CGTTTATCTG GGTCGCGCTG 
GCGATTTTCG TGATGGATGC GATTTATACG CAGCGGCGTA AGCATTAA
 
Protein sequence
MDAKQTRQGV LLALAAYFIW GIAPAYFKLI YYVPADEILT HRVIWSFFFM VALLSVSRQW 
RQVKRLLKTP KKIFLLALSA VLVGGNWLLF IWAVNNHHML EASLGYFINP LVNILLGMIF 
LGERFRRMQW LAVILAVCGV LVQLWTFGSL PIIALGLAFS FAFYGLVRKK IAVEAQTGML 
VETLWLLPVA AIYLFGIADS PTSHMGQNAL SLNLLLMAAG VVTTIPLLCF TGAATRLRLS 
TLGFFQYIGP TLMFLLAVTF YGEVPGADKM VTFAFIWVAL AIFVMDAIYT QRRKH