Gene SeD_A4337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4337 
Symbol 
ID6874095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4181742 
End bp4182458 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content55% 
IMG OID642787263 
Productflavin mononucleotide phosphatase 
Protein accessionYP_002217879 
Protein GI198246207 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTTT ACCGGCCTTT GGGGCGTATT GCCGCGCTCA CCTTTGACCT GGATGATACC 
CTTTATGATA ACCGTCCGGT GATTTTGCGT ACTGAGCAGG AAGCGCTCGC TTTTATGCAA
AATTATCACC CGTCGCTACG TTCGTTTCAA AACGTCGATT TACAGCGGAT ACGGCAGGCG
GTGCGTGAAG CGGAGCCGGA AATCTATCAT GACGTTACCC GCTGGCGCCA TCGTGCGATA
GAGCAGGCCA TGCGGGATGC GGGATTATCG GCGCAGGAGG CCATTGCCGG CGCGAATGCG
GCGATGATGC ATTTTGCCAA ATGGCGCAGC CAGATTGAGG TTCCGCAGGC TACCCATGAG
ACATTACAGC AGCTTGCGAA AAAATGGCCG CTGGTGGCGA TCACTAACGG CAACGCCCAG
CCGGAACTAT TTGGTCTCGG CGATTACTTT AAGTTTGTAC TGCGCGCCGG CCCGGATGGA
CGTTCCAAGC CGTTTAGCGA CATGTATTTC CTGGCGGCGG AAAAGCTGCA TGTGCCGATC
GGCGAGATCC TGCATGTCGG CGACGATCTG ACTACCGATG TGGCTGGCGC TATTCGCTGT
GGGATGCAGG CCTGCTGGAT TAAACCTGAA AATGCCGACC TGATGCGGAC GCAGGACAGC
CGTTTACTGC CGCATATCGA AATTTCGCGG TTGGCATCTC TCACCTCGCT GATATAA
 
Protein sequence
MRFYRPLGRI AALTFDLDDT LYDNRPVILR TEQEALAFMQ NYHPSLRSFQ NVDLQRIRQA 
VREAEPEIYH DVTRWRHRAI EQAMRDAGLS AQEAIAGANA AMMHFAKWRS QIEVPQATHE
TLQQLAKKWP LVAITNGNAQ PELFGLGDYF KFVLRAGPDG RSKPFSDMYF LAAEKLHVPI
GEILHVGDDL TTDVAGAIRC GMQACWIKPE NADLMRTQDS RLLPHIEISR LASLTSLI