Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4327 |
Symbol | hemC |
ID | 6874261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 4173657 |
End bp | 4174598 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642787255 |
Product | porphobilinogen deaminase |
Protein accession | YP_002217871 |
Protein GI | 198243181 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGACA ATGTTTTAAG AATTGCCACA CGCCAAAGTC CCCTTGCGCT TTGGCAGGCA CATTATGTCA AAGACGCATT GATGGCAACC CATCCGGGAC TGACGGTAGA ACTGGTGCCG ATGGTCACAC GCGGCGACGT GATTCTCGAT ACTCCCCTGG CGAAAGTGGG CGGTAAGGGA CTGTTTGTTA AAGAGCTTGA AATCGCGCTG CTGGAAAAAC GCGCTGATAT CGCCGTGCAC TCTATGAAAG ACGTTCCGGT GGCCTTCCCG GACGGTCTCG GTCTGGTGAC CATTTGCGAG CGCGAAGATC CGCGCGACGC GTTTGTCTCG AATAAATATC ACAGTCTGGA CGATCTGCCC GCGGGTAGTA TCGTCGGGAC GTCCAGTTTG CGTCGTCAGT GTCAACTGGC GGAACGCCGT CCGGACCTCA TTATCCGTTC GTTGCGTGGC AACGTTGGCA CACGTCTCGG CAAGCTGGAC AACGGCGATT ATGACGCCAT TATCCTGGCC GTGGCCGGTC TGAAACGCTT AGGTCTGGAG TCGCGCATTC GCACAGCCTT GCCGCCCGAC GTTTCACTTC CTGCCGTAGG CCAGGGCGCC GTCGGGATTG AGTGTCGTCT TGACGACGCG CGAACACAGG CGCTGCTCGC ACCGTTGAAT CACTCGCAAA CCGCGCTGCG CGTAACGGCG GAACGCGCTA TGAACACCCG CCTGGAAGGC GGTTGTCAGG TGCCGATTGG CAGCTATGCA GAAATCATCA ACGGTGAAAT TTGGCTACGC GCGCTGGTTG GCGCGCCGGA CGGTTCGGTG ATGGTGCGCG GCGAACGTCG TGGTTCTCCC GAGCAGGCGG AGCAAATGGG CATCTCGCTT GCAGAGGAAC TGCTGGAAAA CGGCGCACGC GCGATTCTGA CGGAAGTTTA TAACGGCGAG ACGCCCGCAT GA
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Protein sequence | MLDNVLRIAT RQSPLALWQA HYVKDALMAT HPGLTVELVP MVTRGDVILD TPLAKVGGKG LFVKELEIAL LEKRADIAVH SMKDVPVAFP DGLGLVTICE REDPRDAFVS NKYHSLDDLP AGSIVGTSSL RRQCQLAERR PDLIIRSLRG NVGTRLGKLD NGDYDAIILA VAGLKRLGLE SRIRTALPPD VSLPAVGQGA VGIECRLDDA RTQALLAPLN HSQTALRVTA ERAMNTRLEG GCQVPIGSYA EIINGEIWLR ALVGAPDGSV MVRGERRGSP EQAEQMGISL AEELLENGAR AILTEVYNGE TPA
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