Gene SeD_A4317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4317 
Symbol 
ID6871301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4167084 
End bp4167824 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content56% 
IMG OID642787246 
Productputative UDP-N-acetyl-D-mannosaminuronic acid transferase 
Protein accessionYP_002217866 
Protein GI198245652 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1922] Teichoic acid biosynthesis proteins 
TIGRFAM ID[TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.186446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATA ATGCCGCTGC GCCCCTTTAC TCGCTGCGTG GATTACCTCT GATTGGCTGG 
CGCGACATGT CACACGCGCT GAATTATCTG TTTGCCGATG GTCAACTGAA GCAAGGCACG
TTGGTGGCGA TCAACGCCGA AAAGCTGCTG ACGGCGGAAG ATAATCCGGA AGTCCGCGCG
TTGATAGCGG CGGCGGAATT TAAATATGCC GATGGCATCA GCGTGGTGCG TTCAATACGT
AAAAAATTTC CGCAGGCGCA GGTTTCTCGC GTGGCTGGCG CCGACCTTTG GGAAGCGTTA
ATGGCGCGCG CGGGGAAAGA AGGCACACCG GTATTTCTTG TCGGCGGCAA GCCTGAGGTG
CTGGCGCAGA CGGAAGCAAA ACTGCGGACG CAGTGGAACG TCAATATTGT GGGTAGCCAG
GACGGTTACT TTACGCCGGA GCAGCGTCAG GCGCTATTTG CGCGTATCCA TGCCAGCGGC
GCGAAAATTG TCACCGTCGC GATGGGATCG CCAAAACAGG AATTACTCAT GCGCGATTGT
CGGGAAGTGC ATCCCCATGC GCTATATATG GGGGTGGGCG GTACCTATGA TGTGTTTACC
GGTCACGTCA AACGCGCCCC AAAAATATGG CAGAACCTGG GGCTGGAGTG GTTGTATCGT
CTGCTTTCTC AACCGAGGCG TATTACCCGC CAGATGCGCC TGCTGCGCTA TCTTCGCTGG
CACTATACTG GCGATCTCTA A
 
Protein sequence
MTNNAAAPLY SLRGLPLIGW RDMSHALNYL FADGQLKQGT LVAINAEKLL TAEDNPEVRA 
LIAAAEFKYA DGISVVRSIR KKFPQAQVSR VAGADLWEAL MARAGKEGTP VFLVGGKPEV
LAQTEAKLRT QWNVNIVGSQ DGYFTPEQRQ ALFARIHASG AKIVTVAMGS PKQELLMRDC
REVHPHALYM GVGGTYDVFT GHVKRAPKIW QNLGLEWLYR LLSQPRRITR QMRLLRYLRW
HYTGDL