Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4314 |
Symbol | |
ID | 6873351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4163406 |
End bp | 4164656 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642787243 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_002217863 |
Protein GI | 198243340 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.870707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCTTG CTAAAGCCTC CCTGTGGACG GCGGTCAGTA CGCTGGTAAA AATTGGCGCC GGACTGCTGG TGGTGAAACT ACTGGCCGTC TCTTTTGGTC CGTCGGGCGT CGGACAAGCG GGTAACTTCC GCCAGATGAT TACCGTGCTG GGCGTATTGG CTGGCGCCGG GATATTTAAC GGCGTTACCA AACTTGTCGC ACAACATCAT GATAACCCGG CGCAGTTACG TACCGTGGTG GGAACCTCCT CCGCGATGGT ATTGGGGTTC TCTACGCTGC TGGCGCTGGT CTTCTTGCTG GCGGCGGCGC CGATTAGCCA GGGATTGTTC GGTCACACGG ACTATCAAGG GCTGGTGCGT CTGGTTGCGC TGGTACAAAT GGGGATCGCC TGGGCGAACC TGCTGCTGGC GCTAATGAAG GGCTTTCGTG ACGCGTCGGG TAATGCCTTA TCGTTAATTG TCGGCAGCTT TTTGGGCGTC GCCGCTTGGT ATCTCTGCTA CCGTGTCGGC GGCTATGAAG GTGCTCTGCT TGGTCTGGCG CTGGTGCCGG CGCTGGTAGT AGTACCAGCC GGTATGATAC TGATTAAGCG CGGCACCGTC CCGCTACGCT ATCTCAAGCC CTCCTGGGAC AATGGTCTGG CAGGGCAGCT CAGTAAATTT ACCCTGATGG CGCTGATTAC CTCCGTTACG ATGCCGGTCG CCTATGTGAT GATGCGAAAC CAACTGGCCG CGCACTATAG CTGGAGCGAT GTCGGGATCT GGCAGGGCGT AAGCAGTATT TCTGACGCCT ATCTGCAATT TATCACCGCC TCCTTCAGCG TTTACCTGTT ACCCACGCTC TCACGCCTGA CGGAAAAACA GGACATTACG CGTGAAGTGG TAAAAGCGCT GAAATTTGTT TTACCAGCGG TTGCGGCGGC GAGTTTTACC GTCTGGCTAC TGCGCGATTT TGCTATCTGG CTGCTTTTTT CCGCCAAATT CACCGCGATG CGCGATCTGT TCGCCTGGCA GTTAGTGGGC GACGTGCTGA AAGTTGGCGC CTATGTTTTC GGTTATCTGG TGATTGCCAA AGCGTCGTTG CGATTTTACA TTCTGGCCGA AATTAGCCAG TTCATTCTGT TAACGGCGTT CGCTCACTGG CTGATTCCCG CTCACGGCGC GCTGGGTGCG GCACAGGCTT ATATGGTCAC CTATATTGTC TATTTTTCAC TTTGTTGCGG CGTATTTTTA CTCTGGCGTA GGCGAGCATG A
|
Protein sequence | MSLAKASLWT AVSTLVKIGA GLLVVKLLAV SFGPSGVGQA GNFRQMITVL GVLAGAGIFN GVTKLVAQHH DNPAQLRTVV GTSSAMVLGF STLLALVFLL AAAPISQGLF GHTDYQGLVR LVALVQMGIA WANLLLALMK GFRDASGNAL SLIVGSFLGV AAWYLCYRVG GYEGALLGLA LVPALVVVPA GMILIKRGTV PLRYLKPSWD NGLAGQLSKF TLMALITSVT MPVAYVMMRN QLAAHYSWSD VGIWQGVSSI SDAYLQFITA SFSVYLLPTL SRLTEKQDIT REVVKALKFV LPAVAAASFT VWLLRDFAIW LLFSAKFTAM RDLFAWQLVG DVLKVGAYVF GYLVIAKASL RFYILAEISQ FILLTAFAHW LIPAHGALGA AQAYMVTYIV YFSLCCGVFL LWRRRA
|
| |