Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4313 |
Symbol | wecE |
ID | 6873417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4162274 |
End bp | 4163404 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642787242 |
Product | TDP-4-oxo-6-deoxy-D-glucose transaminase |
Protein accession | YP_002217862 |
Protein GI | 198243997 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | [TIGR02379] TDP-4-keto-6-deoxy-D-glucose transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.504363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCCTT TTAATGCGCC GCCGGTGGTG GGAACCGAAC TCGAATACAT GCAGTCTGCA ATGAGCAGCG GCAAACTGTG TGGCGACGGC GGCTTTACGC GTCGTTGCCA GCAGTGGCTG GAGCAACATT TCGGCAGCGC GAAGGTGTTG CTAACGCCTT CCTGTACCGC ATCGCTGGAG ATGGCGGCTC TGTTGTTGGA TATTCAGCCC GGCGATGAAG TGATCATGCC GAGCTTTACG TTTGTCTCCA CTGCTAACGC TTTTGTCCTG CGCGGCGCGA AAATTGTGTT TGTCGATATT CGTCCGGATA CGATGAATAT TGACGAAACG CTGATTGAGG CGGCGATTAC TGATAAAACC CGCGCTATCG TGCCGGTACA CTACGCTGGC GTCGCTTGTG AAATGGACGT CATCATGGCG CTGGCGGATA AGTATAATCT GTTCGTTGTC GAGGATGCCG CCCAGGGTGT GATGTCCACG TACAAAGGGC GCGCATTAGG GACGATCGGT CACATCGGCT GTTTTAGCTT CCATGAAACC AAAAATTACA CCGCTGGCGG CGAAGGCGGC GCGACGCTGA TCAACGATCG TACGCTAATT GAACGCGCGG AGATCATCCG CGAAAAAGGC ACCAACCGTA GCCAGTTCTT CCGTGGTCAG GTGGACAAAT ACACCTGGCG GGATATCGGC TCCAGTTATT TGATGTCCGA TCTGCAGGCT GCCTATCTGT GGGCGCAACT GGAGGCCGCC GATCGTATCA ATCAACAGCG TCTGTCGCTG TGGCAGACTT ACTACGATGC GTTAACGCCG CTGGCGCGCG CCGGGCGTAT CGAGCTGCCT TCTATTCCGG AAAACTGCGG GCATAATGCC CACATGTTTT ACATCAAACT GCGGGATATC GCCGATCGCA GCGCGCTGAT TAATTTCCTG AAAGAGGCGG AAATCATGGC GGTATTCCAT TACATTCCGC TGCATGATTG TCCGGCGGGC GATAAATTCG GCGAGTTTAT CGGGGACGAT GTCTACACCA CAAAAGAGAG CGAACGTTTG TTGCGTCTGC CGCTGTTTTA TAACCTTGCG CCCGTCGATC AACGAACGGT GATTACTACC TTGCTAAATT ATTTCTCCTG A
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Protein sequence | MIPFNAPPVV GTELEYMQSA MSSGKLCGDG GFTRRCQQWL EQHFGSAKVL LTPSCTASLE MAALLLDIQP GDEVIMPSFT FVSTANAFVL RGAKIVFVDI RPDTMNIDET LIEAAITDKT RAIVPVHYAG VACEMDVIMA LADKYNLFVV EDAAQGVMST YKGRALGTIG HIGCFSFHET KNYTAGGEGG ATLINDRTLI ERAEIIREKG TNRSQFFRGQ VDKYTWRDIG SSYLMSDLQA AYLWAQLEAA DRINQQRLSL WQTYYDALTP LARAGRIELP SIPENCGHNA HMFYIKLRDI ADRSALINFL KEAEIMAVFH YIPLHDCPAG DKFGEFIGDD VYTTKESERL LRLPLFYNLA PVDQRTVITT LLNYFS
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